RNA id: AMCG00013367



Basic Information


Item Value
RNA id AMCG00013367
length 966
RNA type mRNA
GC content 0.58
exon number 4
gene id AMCG00013367
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 29697832 ~ 29710210 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCGTGGTGTGACCGTGGGGTTCAAATGCTGCTGACCACGGTGGGGGCTTTTGCCGCGTTCAGTCTGATGACCATCGCCATCGGGACGGACTACTGGCTCTACTCGAGGGCGTACATCTGCAACGCCACCAACATCACCACGGACGAGTCACAGCCCAAGAAGGCGAGGGGCGACCTGACACACTCGGGGCTCTGGAGAATCTGTTGTATCGAAGGGATCAACAAAGGGAGCTGTTACCGGATCAATCACTTCCCCGAGGACAATGACTATGACACAGACAGCTCAGAGTATCTTTTACGTATTGTGCGAGCCTCCAGCATATTCCCCATCCTCAGCACCATCTTGCTGTTGCttggggggctgtgtgtgggTGCAGGACGGATATACAGTAACAAGAACAACATCCTCCTCAGCGCCGGCATCCTGTTTGTAGCAGCAGGTCTGAGCAACATCATCGGCATCATCGTGTACATCTCCAGCAACGCAGGCGACCCAAGCGACAAGAAGGACGAGGACAAGAAGAACCAGTACAACTACGGCTGGTCCTTCTACTTCGGGGCGCTGTCCTTCATCGTGGCCGAGGCCATCGGCGTGCTGGCGGTCAACATCTACATCGAGAAGAATAAGGAGATGAGGTTCAAGACCCGCCGGGAGTTCATTAAGactacctcctcctcctcgccctACTCCCGGATGCCCAGCTACCGCTACCGGAGGAGGCGATCACGCTCCAGCTCGCGGTCCACAGAGCCGTCCCCCTCCCGGGAGACCTCGCCCGTCGGGCTGAAGATGGTCGGCTCCGGCCCGCTGGGTGACATCTCCATGTACACGCTGACTCGGGATTCGCTCAAGAGCAACACGGCCTCCTATAGCCCGGAGCAGGAGTCCAGCTTTCTGCAAGTGCACAACTGCTTCCCCAAGGATGGGAAAGATGGCGTTAACAGGAGGACAACGCCTGTATGA

Function


GO: NA

KEGG:

id description
K04869 CACNG4; voltage-dependent calcium channel gamma-4

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU54727 lncRNA upstream 251134 29434050 ~ 29446698 (+) True G43895
TU54684 lncRNA upstream 495111 29179098 ~ 29202721 (+) True G43855
TU54679 lncRNA upstream 519566 29177051 ~ 29178266 (+) False G43853
TU54935 lncRNA downstream 353198 30063408 ~ 30065492 (+) False AMCG00013382
TU54949 lncRNA downstream 378593 30088803 ~ 30090115 (+) False AMCG00013388
TU55048 lncRNA downstream 632259 30342469 ~ 30343923 (+) False AMCG00013399
TU55072 lncRNA downstream 716414 30426624 ~ 30430649 (+) True AMCG00013408
TU55089 lncRNA downstream 745462 30455672 ~ 30457671 (+) True G44182
AMCG00013364 mRNA upstream 30781 29649501 ~ 29667051 (+) True AMCG00013364
AMCG00013365 mRNA upstream 70274 29586251 ~ 29627558 (+) True AMCG00013365
AMCG00013363 mRNA upstream 124393 29568489 ~ 29573439 (+) True AMCG00013363
AMCG00013356 mRNA upstream 541247 29150242 ~ 29156585 (+) True AMCG00013356
AMCG00013352 mRNA upstream 576397 29115453 ~ 29121435 (+) True AMCG00013352
AMCG00013368 mRNA downstream 11435 29721645 ~ 29724010 (+) True AMCG00013368
AMCG00013366 mRNA downstream 22642 29732852 ~ 29741055 (+) True AMCG00013366
AMCG00013371 mRNA downstream 144683 29854893 ~ 29860612 (+) True AMCG00013371
AMCG00013370 mRNA downstream 150754 29860964 ~ 29869372 (+) True AMCG00013370
AMCG00013369 mRNA downstream 165964 29876174 ~ 29883122 (+) True AMCG00013369
TU54772 other upstream 38884 29640623 ~ 29658948 (+) False AMCG00013364
TU54615 other upstream 593255 29104289 ~ 29104577 (+) True G43802
TU54454 other upstream 1209049 28484273 ~ 28488783 (+) True G43682
TU54319 other upstream 1761894 27934074 ~ 27935938 (+) False AMCG00013310
TU54201 other upstream 2107014 27589139 ~ 27590818 (+) True G43476
TU54850 other downstream 210857 29921067 ~ 29928697 (+) False AMCG00013375
TU55045 other downstream 508700 30218910 ~ 30222209 (+) False AMCG00013396
TU55098 other downstream 780617 30490827 ~ 30495656 (+) True AMCG00013416
TU55111 other downstream 853158 30563368 ~ 30568219 (+) True AMCG00013417
TU55261 other downstream 1066641 30776851 ~ 30777169 (+) True G44325

Expression Profile