Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013424 |
| length | 753 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 5 |
| gene id | AMCG00013424 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 30707785 ~ 30711079 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0001917 | photoreceptor inner segment | cellular_component |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55089 | lncRNA | upstream | 250114 | 30455672 ~ 30457671 (+) | True | G44182 |
| TU55072 | lncRNA | upstream | 277136 | 30426624 ~ 30430649 (+) | True | AMCG00013408 |
| TU55048 | lncRNA | upstream | 363862 | 30342469 ~ 30343923 (+) | False | AMCG00013399 |
| TU54949 | lncRNA | upstream | 617670 | 30088803 ~ 30090115 (+) | False | AMCG00013388 |
| TU54935 | lncRNA | upstream | 642293 | 30063408 ~ 30065492 (+) | False | AMCG00013382 |
| TU55241 | lncRNA | downstream | 23457 | 30734536 ~ 30734795 (+) | True | G44306 |
| TU55242 | lncRNA | downstream | 25730 | 30736809 ~ 30737487 (+) | True | G44307 |
| TU55258 | lncRNA | downstream | 61302 | 30772381 ~ 30774068 (+) | True | G44322 |
| TU55259 | lncRNA | downstream | 63103 | 30774182 ~ 30774548 (+) | True | G44323 |
| TU55328 | lncRNA | downstream | 211667 | 30922746 ~ 30934437 (+) | True | G44379 |
| AMCG00013417 | mRNA | upstream | 141235 | 30563240 ~ 30566550 (+) | False | AMCG00013417 |
| AMCG00013413 | mRNA | upstream | 145223 | 30560481 ~ 30562562 (+) | True | AMCG00013413 |
| AMCG00013414 | mRNA | upstream | 150560 | 30547643 ~ 30557225 (+) | True | AMCG00013414 |
| AMCG00013415 | mRNA | upstream | 166422 | 30536803 ~ 30541363 (+) | True | AMCG00013415 |
| AMCG00013418 | mRNA | upstream | 173760 | 30525855 ~ 30534025 (+) | True | AMCG00013418 |
| AMCG00013423 | mRNA | downstream | 16006 | 30727085 ~ 30729235 (+) | True | AMCG00013423 |
| AMCG00013422 | mRNA | downstream | 59184 | 30770263 ~ 30772373 (+) | True | AMCG00013422 |
| AMCG00013437 | mRNA | downstream | 148645 | 30859724 ~ 30871739 (+) | True | AMCG00013437 |
| AMCG00013438 | mRNA | downstream | 182353 | 30893432 ~ 30895656 (+) | True | AMCG00013438 |
| AMCG00013439 | mRNA | downstream | 195767 | 30906846 ~ 30907997 (+) | True | AMCG00013439 |
| TU55111 | other | upstream | 139566 | 30563368 ~ 30568219 (+) | True | AMCG00013417 |
| TU55098 | other | upstream | 212129 | 30490827 ~ 30495656 (+) | True | AMCG00013416 |
| TU55045 | other | upstream | 485576 | 30218910 ~ 30222209 (+) | False | AMCG00013396 |
| TU54850 | other | upstream | 779088 | 29921067 ~ 29928697 (+) | False | AMCG00013375 |
| TU54772 | other | upstream | 1048837 | 29640623 ~ 29658948 (+) | False | AMCG00013364 |
| TU55261 | other | downstream | 65772 | 30776851 ~ 30777169 (+) | True | G44325 |
| TU55551 | other | downstream | 1193889 | 31904968 ~ 31911801 (+) | True | AMCG00013468 |
| TU55622 | other | downstream | 1562189 | 32273268 ~ 32283499 (+) | False | AMCG00013473 |
| TU55641 | other | downstream | 1712197 | 32423276 ~ 32429887 (+) | False | AMCG00013478 |
| TU55642 | other | downstream | 1712197 | 32423276 ~ 32429887 (+) | True | AMCG00013478 |
