RNA id: AMCG00013431



Basic Information


Item Value
RNA id AMCG00013431
length 411
RNA type mRNA
GC content 0.61
exon number 3
gene id AMCG00013431
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30760603 ~ 30761570 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTCAGTAGCATACGTGTCCAGTGTGAGGTTCTCCTCCATGTCGGGAGAAGCCTGGCTGATTTCCGCTGTCTCTCTGGGACCCAGGCGTagaagaagCGTCTGAAGGAGGAAGCGTCTCCGATCTCAGAGGAGCAACCCCAGAGTGCCACTTTGAAAGGTGAGGACATCCAGGCTCTGGCCATTCGAGAAGAGGACCTGGAGaagCTGCGGGAGTCCAGCCCACCCCAGGGCCACGGCGCGCCCCCTGTGATGACCAGGGTGCTGGTGCGCCGCAGCCGGCCGGTGCTGGATGAGAGGAGGAGGGTGAAAGTTACAGTGGCCAGACCCATCCCCCCAGACGCCCCAGTACAGCTGCTGGACTACACGGGTACAAGAGGCCGGGGGGCTGGGGGACTTGATAATAATTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU55246 lncRNA downstream 29170 30730378 ~ 30731433 (-) False AMCG00013425
TU55183 lncRNA downstream 161552 30553781 ~ 30599051 (-) True G44259
TU55180 lncRNA downstream 197912 30540668 ~ 30562691 (-) False G44256
TU55270 lncRNA upstream 10972 30772542 ~ 30774110 (-) True G44330
TU55331 lncRNA upstream 163916 30925486 ~ 30931267 (-) True G44381
TU55332 lncRNA upstream 170190 30931760 ~ 30935200 (-) True G44382
TU55334 lncRNA upstream 176055 30937625 ~ 30937857 (-) True G44384
TU55378 lncRNA upstream 285155 31046725 ~ 31047119 (-) True G44420
AMCG00013428 mRNA downstream 544 30749783 ~ 30760059 (-) True AMCG00013428
AMCG00013425 mRNA downstream 17960 30730287 ~ 30742643 (-) True AMCG00013425
AMCG00013426 mRNA downstream 37073 30711509 ~ 30723530 (-) True AMCG00013426
AMCG00013427 mRNA downstream 55590 30702766 ~ 30705013 (-) True AMCG00013427
AMCG00013432 mRNA downstream 59938 30698240 ~ 30700665 (-) True AMCG00013432
AMCG00013429 mRNA upstream 12712 30774282 ~ 30778472 (-) True AMCG00013429
AMCG00013434 mRNA upstream 29884 30791454 ~ 30801211 (-) True AMCG00013434
AMCG00013436 mRNA upstream 41973 30803543 ~ 30808546 (-) True AMCG00013436
AMCG00013433 mRNA upstream 55039 30816609 ~ 30820190 (-) True AMCG00013433
AMCG00013435 mRNA upstream 88551 30850121 ~ 30856115 (-) True AMCG00013435
TU55168 other downstream 274272 30483519 ~ 30486331 (-) False AMCG00013411
TU55173 other downstream 274272 30483519 ~ 30486331 (-) True AMCG00013411
TU55169 other downstream 274272 30483716 ~ 30486331 (-) False AMCG00013411
TU55170 other downstream 274272 30483716 ~ 30486331 (-) False AMCG00013411
TU55166 other downstream 282409 30477138 ~ 30478194 (-) False AMCG00013412
TU55745 other upstream 1804190 32565760 ~ 32567952 (-) True G44719
TU55769 other upstream 1860611 32622181 ~ 32623918 (-) False AMCG00013488
TU56122 other upstream 2916654 33678224 ~ 33678907 (-) True G45037
TU56130 other upstream 2931274 33692844 ~ 33699528 (-) True AMCG00013531
TU56648 other upstream 6197607 36959177 ~ 36959914 (-) True G45468

Expression Profile