RNA id: AMCG00013437



Basic Information


Item Value
RNA id AMCG00013437
length 762
RNA type mRNA
GC content 0.62
exon number 7
gene id AMCG00013437
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30859724 ~ 30871739 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAAACCTCCTCTGCACAGAACAAAGCAGTCCAAGCTGTGGCCAGTCTCAGCTCCCAGTGAGCGCAAGGCATCCTCAGGCCTCTCTCAGCGCCAGGAAGAGGACAGAGTGGAGCCCAGCCAGCTAGGTACCTCTGTGCCTCGACTGTTCCCCTGCCAAGCACAACCCTGTGTGCGCGGAGAGTCGCTTCTGCCCCTCAAGAAGAGGGTCAGTGCCACAGTGGGGGTGTCAATGCAGGGCTCCCCagactctgtgctgtgtgccgCCAATGTGCCCGAGATATATAGCGCCCTGCTGGACTGCATGGGCGACTACACTACGGACAGCCGCGGAGATGTGGGAGCATGGGTGCGGGAGGCTGCGATGACCAGCCTGATGGAGGTGACGTTCCTCCTGGTGAGGAGTGACCCAGGGCTGCTCTCTCCTGACATTTGCAGCCGCATGTTGTGCAGCCTGGTCCAGCAGGCGGCGGAGAAGATCGACCGATACCGTGCCCACGCTGGCTCCGTGTTCCTGCGCATTCTGCACTGCCAGGACCCCCCCGTCCCTCACATCCCCCACCGGGAGGAGCTGCTCAGCATCTTCCCCAGtgatGGCGCGGAGACCCTGAACTGGAACGCCCCGTCGCAGGCCTTCCCCCATGTGACACAGCTGCTGCGCCTGCCTGCCTACCAGTACCGCACCCTGCTGgggctctgtGCTGCTAATCCCTGGCGGTTGAGCCTGTGTCAAGTGAGGTTTCAGGGCTCAGCAGAGACATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU55259 lncRNA upstream 85176 30774182 ~ 30774548 (+) True G44323
TU55258 lncRNA upstream 85656 30772381 ~ 30774068 (+) True G44322
TU55242 lncRNA upstream 122237 30736809 ~ 30737487 (+) True G44307
TU55241 lncRNA upstream 124929 30734536 ~ 30734795 (+) True G44306
TU55089 lncRNA upstream 402053 30455672 ~ 30457671 (+) True G44182
TU55328 lncRNA downstream 51007 30922746 ~ 30934437 (+) True G44379
TU55329 lncRNA downstream 52997 30924736 ~ 30926480 (+) True G44380
TU55333 lncRNA downstream 64101 30935840 ~ 30936171 (+) True G44383
TU55343 lncRNA downstream 95170 30966909 ~ 30970500 (+) True G44388
TU55394 lncRNA downstream 227611 31099350 ~ 31106308 (+) True G44433
AMCG00013422 mRNA upstream 87351 30770263 ~ 30772373 (+) True AMCG00013422
AMCG00013423 mRNA upstream 130489 30727085 ~ 30729235 (+) True AMCG00013423
AMCG00013424 mRNA upstream 148645 30707785 ~ 30711079 (+) True AMCG00013424
AMCG00013417 mRNA upstream 293174 30563240 ~ 30566550 (+) False AMCG00013417
AMCG00013413 mRNA upstream 297162 30560481 ~ 30562562 (+) True AMCG00013413
AMCG00013438 mRNA downstream 21693 30893432 ~ 30895656 (+) True AMCG00013438
AMCG00013439 mRNA downstream 35107 30906846 ~ 30907997 (+) True AMCG00013439
AMCG00013440 mRNA downstream 68341 30940080 ~ 30949350 (+) True AMCG00013440
AMCG00013446 mRNA downstream 113733 30985472 ~ 31044736 (+) True AMCG00013446
AMCG00013447 mRNA downstream 235903 31107642 ~ 31131214 (+) True AMCG00013447
TU55261 other upstream 82555 30776851 ~ 30777169 (+) True G44325
TU55111 other upstream 291505 30563368 ~ 30568219 (+) True AMCG00013417
TU55098 other upstream 364068 30490827 ~ 30495656 (+) True AMCG00013416
TU55045 other upstream 637515 30218910 ~ 30222209 (+) False AMCG00013396
TU54850 other upstream 931027 29921067 ~ 29928697 (+) False AMCG00013375
TU55551 other downstream 1033229 31904968 ~ 31911801 (+) True AMCG00013468
TU55622 other downstream 1401529 32273268 ~ 32283499 (+) False AMCG00013473
TU55641 other downstream 1551537 32423276 ~ 32429887 (+) False AMCG00013478
TU55642 other downstream 1551537 32423276 ~ 32429887 (+) True AMCG00013478
TU55933 other downstream 2234553 33106292 ~ 33106595 (+) True G44870

Expression Profile