Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013451 |
| length | 1137 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 1 |
| gene id | AMCG00013451 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 31149173 ~ 31150309 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007218 | neuropeptide signaling pathway | biological_process |
| GO:0006935 | chemotaxis | biological_process |
| GO:0007268 | chemical synaptic transmission | biological_process |
| GO:0070098 | chemokine-mediated signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004950 | chemokine receptor activity | molecular_function |
| GO:0004983 | neuropeptide Y receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55394 | lncRNA | upstream | 42865 | 31099350 ~ 31106308 (+) | True | G44433 |
| TU55343 | lncRNA | upstream | 178673 | 30966909 ~ 30970500 (+) | True | G44388 |
| TU55333 | lncRNA | upstream | 213002 | 30935840 ~ 30936171 (+) | True | G44383 |
| TU55328 | lncRNA | upstream | 214736 | 30922746 ~ 30934437 (+) | True | G44379 |
| TU55435 | lncRNA | downstream | 153228 | 31303537 ~ 31310491 (+) | True | G44468 |
| TU55436 | lncRNA | downstream | 153228 | 31303537 ~ 31308223 (+) | False | G44468 |
| TU55456 | lncRNA | downstream | 218898 | 31369207 ~ 31371002 (+) | True | G44486 |
| TU55503 | lncRNA | downstream | 497054 | 31647363 ~ 31665161 (+) | False | G44529 |
| TU55502 | lncRNA | downstream | 508017 | 31658326 ~ 31665161 (+) | True | G44529 |
| AMCG00013447 | mRNA | upstream | 17959 | 31107642 ~ 31131214 (+) | True | AMCG00013447 |
| AMCG00013446 | mRNA | upstream | 104437 | 30985472 ~ 31044736 (+) | True | AMCG00013446 |
| AMCG00013440 | mRNA | upstream | 199823 | 30940080 ~ 30949350 (+) | True | AMCG00013440 |
| AMCG00013439 | mRNA | upstream | 241176 | 30906846 ~ 30907997 (+) | True | AMCG00013439 |
| AMCG00013438 | mRNA | upstream | 253517 | 30893432 ~ 30895656 (+) | True | AMCG00013438 |
| AMCG00013455 | mRNA | downstream | 206496 | 31356805 ~ 31358367 (+) | True | AMCG00013455 |
| AMCG00013460 | mRNA | downstream | 314385 | 31464694 ~ 31465848 (+) | True | AMCG00013460 |
| AMCG00013459 | mRNA | downstream | 334233 | 31484542 ~ 31491406 (+) | True | AMCG00013459 |
| AMCG00013458 | mRNA | downstream | 345810 | 31496119 ~ 31502050 (+) | True | AMCG00013458 |
| AMCG00013461 | mRNA | downstream | 466615 | 31616924 ~ 31641312 (+) | True | AMCG00013461 |
| TU55261 | other | upstream | 372004 | 30776851 ~ 30777169 (+) | True | G44325 |
| TU55111 | other | upstream | 580954 | 30563368 ~ 30568219 (+) | True | AMCG00013417 |
| TU55098 | other | upstream | 653517 | 30490827 ~ 30495656 (+) | True | AMCG00013416 |
| TU55045 | other | upstream | 926964 | 30218910 ~ 30222209 (+) | False | AMCG00013396 |
| TU54850 | other | upstream | 1220476 | 29921067 ~ 29928697 (+) | False | AMCG00013375 |
| TU55551 | other | downstream | 754659 | 31904968 ~ 31911801 (+) | True | AMCG00013468 |
| TU55622 | other | downstream | 1122959 | 32273268 ~ 32283499 (+) | False | AMCG00013473 |
| TU55641 | other | downstream | 1272967 | 32423276 ~ 32429887 (+) | False | AMCG00013478 |
| TU55642 | other | downstream | 1272967 | 32423276 ~ 32429887 (+) | True | AMCG00013478 |
| TU55933 | other | downstream | 1955983 | 33106292 ~ 33106595 (+) | True | G44870 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000308_01003736_01006059.mRNA | True | 2356 | mRNA | 0.49 | 2 | CI01000308 | 1003736 ~ 1007117 (+) |
