RNA id: AMCG00013465



Basic Information


Item Value
RNA id AMCG00013465
length 330
RNA type mRNA
GC content 0.44
exon number 3
gene id AMCG00013465
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 31772421 ~ 31773193 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCCCAGTTTTTCTGGAGAGATCTGATCAGGTCATATGGTATCTCCTTTCATCAGTATGCTGAAGACACTGaactatattttgaaattcGAGACTGCCTGACTAATGGCATCCAAAATGACCGTGTCCTGACCAGCATATCGTGTCAGGACCACATTTCCCAAACTTTATTGGAACTGCACTGGTTACCAGTAGACCTTCGGGCTCAATTTAAACTACTCTGCATAACCCACAAAAGCGCTCCATCAACACATCACAGCTATCTGTCGGACAAACTGGAGATCTGGAACAGACTACCATCCATCTTAACTCTGAACTCCTTTCATTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU55503 lncRNA upstream 107260 31647363 ~ 31665161 (+) False G44529
TU55502 lncRNA upstream 107260 31658326 ~ 31665161 (+) True G44529
TU55456 lncRNA upstream 401419 31369207 ~ 31371002 (+) True G44486
TU55435 lncRNA upstream 461930 31303537 ~ 31310491 (+) True G44468
TU55535 lncRNA downstream 11400 31784593 ~ 31871473 (+) True G44549
TU55549 lncRNA downstream 125428 31898621 ~ 31899202 (+) True G44561
TU55573 lncRNA downstream 257063 32030256 ~ 32030922 (+) True G44581
TU55582 lncRNA downstream 280540 32053733 ~ 32057626 (+) True G44590
TU55590 lncRNA downstream 363037 32136230 ~ 32138577 (+) True G44598
AMCG00013462 mRNA upstream 19013 31742807 ~ 31753408 (+) True AMCG00013462
AMCG00013461 mRNA upstream 131109 31616924 ~ 31641312 (+) True AMCG00013461
AMCG00013458 mRNA upstream 270371 31496119 ~ 31502050 (+) True AMCG00013458
AMCG00013459 mRNA upstream 281015 31484542 ~ 31491406 (+) True AMCG00013459
AMCG00013460 mRNA upstream 306573 31464694 ~ 31465848 (+) True AMCG00013460
AMCG00013468 mRNA downstream 128337 31901530 ~ 31911171 (+) False AMCG00013468
AMCG00013469 mRNA downstream 141908 31915101 ~ 31921375 (+) True AMCG00013469
AMCG00013472 mRNA downstream 215497 31988690 ~ 31990176 (+) True AMCG00013472
AMCG00013474 mRNA downstream 452978 32226171 ~ 32226557 (+) True AMCG00013474
AMCG00013473 mRNA downstream 500236 32273429 ~ 32283927 (+) True AMCG00013473
TU55261 other upstream 995252 30776851 ~ 30777169 (+) True G44325
TU55111 other upstream 1204202 30563368 ~ 30568219 (+) True AMCG00013417
TU55098 other upstream 1276765 30490827 ~ 30495656 (+) True AMCG00013416
TU55045 other upstream 1550212 30218910 ~ 30222209 (+) False AMCG00013396
TU54850 other upstream 1843724 29921067 ~ 29928697 (+) False AMCG00013375
TU55551 other downstream 131775 31904968 ~ 31911801 (+) True AMCG00013468
TU55622 other downstream 500075 32273268 ~ 32283499 (+) False AMCG00013473
TU55641 other downstream 650083 32423276 ~ 32429887 (+) False AMCG00013478
TU55642 other downstream 650083 32423276 ~ 32429887 (+) True AMCG00013478
TU55933 other downstream 1333099 33106292 ~ 33106595 (+) True G44870

Expression Profile