Item | Value |
---|---|
RNA id | TU55639 |
length | 1039 |
lncRNA type | sense_over |
GC content | 0.53 |
exon number | 2 |
gene id | AMCG00013477 |
representative | False |
Item | Value |
---|---|
chromosome id | CM030125.1 |
NCBI id | CM030125.1 |
chromosome length | 49972098 |
location | 32393818 ~ 32400452 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU55623 | lncRNA | upstream | 110695 | 32286014 ~ 32286159 (+) | True | G44620 |
TU55621 | lncRNA | upstream | 111903 | 32283614 ~ 32284951 (+) | False | AMCG00013473 |
TU55609 | lncRNA | upstream | 205459 | 32191179 ~ 32191395 (+) | True | G44613 |
TU55590 | lncRNA | upstream | 258277 | 32136230 ~ 32138577 (+) | True | G44598 |
TU55582 | lncRNA | upstream | 339228 | 32053733 ~ 32057626 (+) | True | G44590 |
TU55727 | lncRNA | downstream | 144476 | 32542635 ~ 32543676 (+) | True | G44702 |
TU55784 | lncRNA | downstream | 257344 | 32655503 ~ 32655702 (+) | True | G44747 |
TU55810 | lncRNA | downstream | 358579 | 32756738 ~ 32758380 (+) | True | G44769 |
TU55832 | lncRNA | downstream | 439156 | 32837315 ~ 32837843 (+) | True | G44790 |
TU55923 | lncRNA | downstream | 685569 | 33083728 ~ 33088760 (+) | True | G44860 |
AMCG00013479 | mRNA | upstream | 6892 | 32346138 ~ 32389962 (+) | True | AMCG00013479 |
AMCG00013473 | mRNA | upstream | 112927 | 32273429 ~ 32283927 (+) | True | AMCG00013473 |
AMCG00013474 | mRNA | upstream | 170297 | 32226171 ~ 32226557 (+) | True | AMCG00013474 |
AMCG00013472 | mRNA | upstream | 406678 | 31988690 ~ 31990176 (+) | True | AMCG00013472 |
AMCG00013469 | mRNA | upstream | 475479 | 31915101 ~ 31921375 (+) | True | AMCG00013469 |
AMCG00013478 | mRNA | downstream | 25603 | 32423762 ~ 32455686 (+) | False | AMCG00013478 |
AMCG00013476 | mRNA | downstream | 65937 | 32464096 ~ 32475750 (+) | True | AMCG00013476 |
AMCG00013481 | mRNA | downstream | 91912 | 32490071 ~ 32494429 (+) | True | AMCG00013481 |
AMCG00013485 | mRNA | downstream | 191569 | 32589728 ~ 32599218 (+) | True | AMCG00013485 |
AMCG00013487 | mRNA | downstream | 206576 | 32604735 ~ 32608797 (+) | True | AMCG00013487 |
TU55622 | other | upstream | 113355 | 32273268 ~ 32283499 (+) | False | AMCG00013473 |
TU55551 | other | upstream | 485053 | 31904968 ~ 31911801 (+) | True | AMCG00013468 |
TU55261 | other | upstream | 1619685 | 30776851 ~ 30777169 (+) | True | G44325 |
TU55111 | other | upstream | 1828635 | 30563368 ~ 30568219 (+) | True | AMCG00013417 |
TU55098 | other | upstream | 1901198 | 30490827 ~ 30495656 (+) | True | AMCG00013416 |
TU55641 | other | downstream | 25117 | 32423276 ~ 32429887 (+) | False | AMCG00013478 |
TU55642 | other | downstream | 25117 | 32423276 ~ 32429887 (+) | True | AMCG00013478 |
TU55933 | other | downstream | 708133 | 33106292 ~ 33106595 (+) | True | G44870 |
TU55990 | other | downstream | 978361 | 33376520 ~ 33394148 (+) | False | AMCG00013515 |
TU56031 | other | downstream | 1044235 | 33442394 ~ 33446921 (+) | False | AMCG00013516 |