Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013481 |
| length | 762 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 5 |
| gene id | AMCG00013481 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 32490071 ~ 32494429 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02902 | RP-L28, MRPL28, rpmB; large subunit ribosomal protein L28 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55639 | lncRNA | upstream | 91912 | 32396854 ~ 32398159 (+) | False | AMCG00013477 |
| TU55623 | lncRNA | upstream | 203912 | 32286014 ~ 32286159 (+) | True | G44620 |
| TU55621 | lncRNA | upstream | 205120 | 32283614 ~ 32284951 (+) | False | AMCG00013473 |
| TU55609 | lncRNA | upstream | 298676 | 32191179 ~ 32191395 (+) | True | G44613 |
| TU55590 | lncRNA | upstream | 351494 | 32136230 ~ 32138577 (+) | True | G44598 |
| TU55727 | lncRNA | downstream | 48206 | 32542635 ~ 32543676 (+) | True | G44702 |
| TU55784 | lncRNA | downstream | 161074 | 32655503 ~ 32655702 (+) | True | G44747 |
| TU55810 | lncRNA | downstream | 262309 | 32756738 ~ 32758380 (+) | True | G44769 |
| TU55832 | lncRNA | downstream | 342886 | 32837315 ~ 32837843 (+) | True | G44790 |
| TU55923 | lncRNA | downstream | 589299 | 33083728 ~ 33088760 (+) | True | G44860 |
| AMCG00013476 | mRNA | upstream | 14321 | 32464096 ~ 32475750 (+) | True | AMCG00013476 |
| AMCG00013478 | mRNA | upstream | 34385 | 32423762 ~ 32455686 (+) | False | AMCG00013478 |
| AMCG00013477 | mRNA | upstream | 89619 | 32393818 ~ 32400452 (+) | True | AMCG00013477 |
| AMCG00013479 | mRNA | upstream | 100109 | 32346138 ~ 32389962 (+) | True | AMCG00013479 |
| AMCG00013473 | mRNA | upstream | 206144 | 32273429 ~ 32283927 (+) | True | AMCG00013473 |
| AMCG00013485 | mRNA | downstream | 95299 | 32589728 ~ 32599218 (+) | True | AMCG00013485 |
| AMCG00013487 | mRNA | downstream | 110306 | 32604735 ~ 32608797 (+) | True | AMCG00013487 |
| AMCG00013486 | mRNA | downstream | 134498 | 32628927 ~ 32636264 (+) | True | AMCG00013486 |
| AMCG00013490 | mRNA | downstream | 148016 | 32642445 ~ 32656154 (+) | True | AMCG00013490 |
| AMCG00013491 | mRNA | downstream | 198745 | 32693174 ~ 32711904 (+) | True | AMCG00013491 |
| TU55641 | other | upstream | 60184 | 32423276 ~ 32429887 (+) | False | AMCG00013478 |
| TU55642 | other | upstream | 60184 | 32423276 ~ 32429887 (+) | True | AMCG00013478 |
| TU55622 | other | upstream | 206572 | 32273268 ~ 32283499 (+) | False | AMCG00013473 |
| TU55551 | other | upstream | 578270 | 31904968 ~ 31911801 (+) | True | AMCG00013468 |
| TU55261 | other | upstream | 1712902 | 30776851 ~ 30777169 (+) | True | G44325 |
| TU55933 | other | downstream | 611863 | 33106292 ~ 33106595 (+) | True | G44870 |
| TU55990 | other | downstream | 882091 | 33376520 ~ 33394148 (+) | False | AMCG00013515 |
| TU56031 | other | downstream | 947965 | 33442394 ~ 33446921 (+) | False | AMCG00013516 |
| TU56113 | other | downstream | 1201163 | 33695592 ~ 33699545 (+) | True | G45029 |
| TU56162 | other | downstream | 1620244 | 34114673 ~ 34114939 (+) | True | G45072 |
