Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013589 |
| length | 600 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 9 |
| gene id | AMCG00013589 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 37101686 ~ 37105980 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| id | description |
|---|---|
| K08583 | CAPNS1, CAPN4; calpain, small subunit 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU56685 | lncRNA | upstream | 37422 | 37063957 ~ 37064264 (+) | True | G45499 |
| TU56578 | lncRNA | upstream | 318066 | 36782569 ~ 36783620 (+) | True | G45408 |
| TU56575 | lncRNA | upstream | 371730 | 36727950 ~ 36729956 (+) | True | G45405 |
| TU56573 | lncRNA | upstream | 381697 | 36719652 ~ 36719989 (+) | True | G45403 |
| TU56567 | lncRNA | upstream | 396793 | 36704652 ~ 36704893 (+) | True | G45397 |
| TU56746 | lncRNA | downstream | 145221 | 37251201 ~ 37290765 (+) | True | G45538 |
| TU56957 | lncRNA | downstream | 703911 | 37809891 ~ 37816573 (+) | True | AMCG00013616 |
| TU56959 | lncRNA | downstream | 712391 | 37818371 ~ 37821575 (+) | True | AMCG00013618 |
| TU56996 | lncRNA | downstream | 770403 | 37876383 ~ 37932198 (+) | True | G45737 |
| TU57092 | lncRNA | downstream | 967275 | 38073255 ~ 38073852 (+) | True | G45805 |
| AMCG00013584 | mRNA | upstream | 27371 | 37071514 ~ 37074315 (+) | True | AMCG00013584 |
| AMCG00013581 | mRNA | upstream | 44910 | 37047933 ~ 37056776 (+) | True | AMCG00013581 |
| AMCG00013582 | mRNA | upstream | 67212 | 37018451 ~ 37034474 (+) | True | AMCG00013582 |
| AMCG00013583 | mRNA | upstream | 88290 | 36977272 ~ 37013396 (+) | True | AMCG00013583 |
| AMCG00013575 | mRNA | upstream | 240889 | 36843528 ~ 36860797 (+) | True | AMCG00013575 |
| AMCG00013587 | mRNA | downstream | 5788 | 37111768 ~ 37122611 (+) | True | AMCG00013587 |
| AMCG00013586 | mRNA | downstream | 23038 | 37129018 ~ 37133189 (+) | True | AMCG00013586 |
| AMCG00013588 | mRNA | downstream | 48287 | 37154267 ~ 37170647 (+) | True | AMCG00013588 |
| AMCG00013593 | mRNA | downstream | 120676 | 37226656 ~ 37228647 (+) | True | AMCG00013593 |
| AMCG00013595 | mRNA | downstream | 209233 | 37315213 ~ 37327711 (+) | True | AMCG00013595 |
| TU56611 | other | upstream | 224083 | 36874907 ~ 36877603 (+) | True | G45439 |
| TU56576 | other | upstream | 363207 | 36736677 ~ 36738479 (+) | True | G45406 |
| TU56545 | other | upstream | 463538 | 36630977 ~ 36638148 (+) | False | AMCG00013571 |
| TU56506 | other | upstream | 697785 | 36403354 ~ 36403901 (+) | True | G45338 |
| TU56494 | other | upstream | 731599 | 36338262 ~ 36370087 (+) | True | AMCG00013566 |
| TU56708 | other | downstream | 7522 | 37113502 ~ 37120571 (+) | False | AMCG00013587 |
| TU56759 | other | downstream | 209506 | 37315486 ~ 37320331 (+) | False | AMCG00013595 |
| TU57084 | other | downstream | 948924 | 38054904 ~ 38058834 (+) | False | AMCG00013629 |
| TU57149 | other | downstream | 1124586 | 38230566 ~ 38231330 (+) | True | G45850 |
| TU57196 | other | downstream | 1264676 | 38370656 ~ 38373198 (+) | True | G45894 |
