Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013606 |
| length | 1035 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 10 |
| gene id | AMCG00013606 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 37671106 ~ 37675959 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0090501 | RNA phosphodiester bond hydrolysis | biological_process |
| GO:0016787 | hydrolase activity | molecular_function |
| id | description |
|---|---|
| K01166 | RNASET2; ribonuclease T2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU56746 | lncRNA | upstream | 380341 | 37251201 ~ 37290765 (+) | True | G45538 |
| TU56685 | lncRNA | upstream | 606842 | 37063957 ~ 37064264 (+) | True | G45499 |
| TU56578 | lncRNA | upstream | 887486 | 36782569 ~ 36783620 (+) | True | G45408 |
| TU56575 | lncRNA | upstream | 941150 | 36727950 ~ 36729956 (+) | True | G45405 |
| TU56573 | lncRNA | upstream | 951117 | 36719652 ~ 36719989 (+) | True | G45403 |
| TU56957 | lncRNA | downstream | 133932 | 37809891 ~ 37816573 (+) | True | AMCG00013616 |
| TU56959 | lncRNA | downstream | 142412 | 37818371 ~ 37821575 (+) | True | AMCG00013618 |
| TU56996 | lncRNA | downstream | 200424 | 37876383 ~ 37932198 (+) | True | G45737 |
| TU57092 | lncRNA | downstream | 397296 | 38073255 ~ 38073852 (+) | True | G45805 |
| TU57100 | lncRNA | downstream | 422031 | 38097990 ~ 38098531 (+) | True | G45812 |
| AMCG00013605 | mRNA | upstream | 4162 | 37660397 ~ 37666944 (+) | True | AMCG00013605 |
| AMCG00013604 | mRNA | upstream | 68121 | 37595072 ~ 37602985 (+) | True | AMCG00013604 |
| AMCG00013602 | mRNA | upstream | 89674 | 37574350 ~ 37581432 (+) | True | AMCG00013602 |
| AMCG00013599 | mRNA | upstream | 152128 | 37487188 ~ 37518978 (+) | True | AMCG00013599 |
| AMCG00013601 | mRNA | upstream | 184296 | 37411666 ~ 37486810 (+) | True | AMCG00013601 |
| AMCG00013603 | mRNA | downstream | 749 | 37676708 ~ 37683789 (+) | True | AMCG00013603 |
| AMCG00013612 | mRNA | downstream | 37789 | 37713748 ~ 37714896 (+) | True | AMCG00013612 |
| AMCG00013609 | mRNA | downstream | 90032 | 37765991 ~ 37777845 (+) | True | AMCG00013609 |
| AMCG00013616 | mRNA | downstream | 129248 | 37805207 ~ 37817764 (+) | False | AMCG00013616 |
| AMCG00013618 | mRNA | downstream | 142621 | 37818580 ~ 37818846 (+) | False | AMCG00013618 |
| TU56759 | other | upstream | 350775 | 37315486 ~ 37320331 (+) | False | AMCG00013595 |
| TU56708 | other | upstream | 550535 | 37113502 ~ 37120571 (+) | False | AMCG00013587 |
| TU56611 | other | upstream | 793503 | 36874907 ~ 36877603 (+) | True | G45439 |
| TU56576 | other | upstream | 932627 | 36736677 ~ 36738479 (+) | True | G45406 |
| TU56545 | other | upstream | 1032958 | 36630977 ~ 36638148 (+) | False | AMCG00013571 |
| TU57084 | other | downstream | 378945 | 38054904 ~ 38058834 (+) | False | AMCG00013629 |
| TU57149 | other | downstream | 554607 | 38230566 ~ 38231330 (+) | True | G45850 |
| TU57196 | other | downstream | 694697 | 38370656 ~ 38373198 (+) | True | G45894 |
| TU57357 | other | downstream | 888539 | 38564498 ~ 38564994 (+) | False | AMCG00013654 |
| TU57427 | other | downstream | 1143450 | 38819409 ~ 38821953 (+) | False | AMCG00013681 |
