Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013609 |
| length | 1089 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 9 |
| gene id | AMCG00013609 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 37765991 ~ 37777845 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0061484 | hematopoietic stem cell homeostasis | biological_process |
| GO:0060216 | definitive hemopoiesis | biological_process |
| GO:0016925 | protein sumoylation | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0019948 | SUMO activating enzyme activity | molecular_function |
| GO:0016874 | ligase activity | molecular_function |
| GO:0008022 | protein C-terminus binding | molecular_function |
| id | description |
|---|---|
| K10684 | UBLE1A, SAE1; ubiquitin-like 1-activating enzyme E1 A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU56746 | lncRNA | upstream | 475226 | 37251201 ~ 37290765 (+) | True | G45538 |
| TU56685 | lncRNA | upstream | 701727 | 37063957 ~ 37064264 (+) | True | G45499 |
| TU56578 | lncRNA | upstream | 982371 | 36782569 ~ 36783620 (+) | True | G45408 |
| TU56575 | lncRNA | upstream | 1036035 | 36727950 ~ 36729956 (+) | True | G45405 |
| TU56573 | lncRNA | upstream | 1046002 | 36719652 ~ 36719989 (+) | True | G45403 |
| TU56957 | lncRNA | downstream | 32046 | 37809891 ~ 37816573 (+) | True | AMCG00013616 |
| TU56959 | lncRNA | downstream | 40526 | 37818371 ~ 37821575 (+) | True | AMCG00013618 |
| TU56996 | lncRNA | downstream | 98538 | 37876383 ~ 37932198 (+) | True | G45737 |
| TU57092 | lncRNA | downstream | 295410 | 38073255 ~ 38073852 (+) | True | G45805 |
| TU57100 | lncRNA | downstream | 320145 | 38097990 ~ 38098531 (+) | True | G45812 |
| AMCG00013612 | mRNA | upstream | 51095 | 37713748 ~ 37714896 (+) | True | AMCG00013612 |
| AMCG00013603 | mRNA | upstream | 82202 | 37676708 ~ 37683789 (+) | True | AMCG00013603 |
| AMCG00013606 | mRNA | upstream | 90032 | 37671106 ~ 37675959 (+) | True | AMCG00013606 |
| AMCG00013605 | mRNA | upstream | 99047 | 37660397 ~ 37666944 (+) | True | AMCG00013605 |
| AMCG00013604 | mRNA | upstream | 163006 | 37595072 ~ 37602985 (+) | True | AMCG00013604 |
| AMCG00013616 | mRNA | downstream | 27362 | 37805207 ~ 37817764 (+) | False | AMCG00013616 |
| AMCG00013618 | mRNA | downstream | 40735 | 37818580 ~ 37818846 (+) | False | AMCG00013618 |
| AMCG00013614 | mRNA | downstream | 67588 | 37845433 ~ 37852929 (+) | True | AMCG00013614 |
| AMCG00013615 | mRNA | downstream | 82544 | 37860389 ~ 37867034 (+) | True | AMCG00013615 |
| AMCG00013613 | mRNA | downstream | 94989 | 37872834 ~ 37876087 (+) | True | AMCG00013613 |
| TU56759 | other | upstream | 445660 | 37315486 ~ 37320331 (+) | False | AMCG00013595 |
| TU56708 | other | upstream | 645420 | 37113502 ~ 37120571 (+) | False | AMCG00013587 |
| TU56611 | other | upstream | 888388 | 36874907 ~ 36877603 (+) | True | G45439 |
| TU56576 | other | upstream | 1027512 | 36736677 ~ 36738479 (+) | True | G45406 |
| TU56545 | other | upstream | 1127843 | 36630977 ~ 36638148 (+) | False | AMCG00013571 |
| TU57084 | other | downstream | 277059 | 38054904 ~ 38058834 (+) | False | AMCG00013629 |
| TU57149 | other | downstream | 452721 | 38230566 ~ 38231330 (+) | True | G45850 |
| TU57196 | other | downstream | 592811 | 38370656 ~ 38373198 (+) | True | G45894 |
| TU57357 | other | downstream | 786653 | 38564498 ~ 38564994 (+) | False | AMCG00013654 |
| TU57427 | other | downstream | 1041564 | 38819409 ~ 38821953 (+) | False | AMCG00013681 |
