RNA id: AMCG00013655



Basic Information


Item Value
RNA id AMCG00013655
length 1047
RNA type mRNA
GC content 0.57
exon number 7
gene id AMCG00013655
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38546328 ~ 38550955 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTGTTTAACATGTCGGCGCTGCGGGAGACGTTGGGAGGAGGTGGGGAGGGCGGGAGGGGGGTGACCCGCGCCGAGCTGCGTCTGTTCATCAAGCGAAACAGTCTCCAGGAAGGAAAGAGTCAGAGACTGGAGCTGTACAAGGTCTCAGGCAATGACTCCCAATATCTGAACTCACGCTTCGTGTACAAGGACTCCGCCGACCGCTGGCTCTCCTTCGACGTCACACAGACAGTCAAAGATTGGCTGCCGGGGAACGAGGAGGAGCAGGGCTTCAAGCTGAAGCTGCACTGTGACTgtATGGATCCTCCTCGGGGTGATATGAAGGCAGTATGGGAGATAAACAAGAAGCCGCCCCACCTGCTGGTGATGTCACTTCCCCCCGAGATCGCACAACCTGGGTTCAGCCGCGCCCGCCGGGCCGCCCCAGAAGAAAACTGCGAgcctgGACAGTCCTGCTGTGTGCAGAGCCTCTATATCAATTTCCGTGATGACCTGGGCTGGAAGTGGATCCATGAGCCAAAGGGTTACTATGCCAACTACTGCACTGGCTCCTGCACCTACATCTGGAGCGCTGACAACAAGTACTCCAAgATCCTGGCTCTCTATAAGCACCATAACCCCGGGGCATCGGCCCAGCCATGCTGCAGTCCGCAGGTGCTGGAGCCGCTGCCCATCCTCACCAGAACCACCATTTCAATCTGGACCCAAATGGACTTCCGGGATGGAGTCAGGGTGAGACTAAAGGACAGTGTGGCTGATTTTGGGGGGGGTGGAGCCTGTGCTGAGACTGCAGTAGCCAGCATTCTTGAGGAACCGACCCAATTAGTAATTATGCGGGCGGGGCCTTGCCTGAAACGGAAGACTGCTGCGGGTCGGGAAGGGGGCAGCTCAAGTGGAAAGATCAAGAATCTTCCCGTTGAGAACTTTCAAAAGGATTGTGGAGTTCTGGAATCTCGGGACATTCCTCGCTGGCACAGAGTTCCACAGGGAGTGAGATCATCGCCGGCTCCAGACCATCAACTGTCCCCCGATCAAGACGACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU57335 lncRNA upstream 9270 38536528 ~ 38537058 (+) True G45999
TU57326 lncRNA upstream 20916 38524712 ~ 38525412 (+) True G45990
TU57257 lncRNA upstream 72013 38417565 ~ 38474315 (+) True G45941
TU57270 lncRNA upstream 73622 38470054 ~ 38472706 (+) True G45951
TU57165 lncRNA upstream 191617 38353914 ~ 38354711 (+) True G45865
TU57358 lncRNA downstream 15694 38566649 ~ 38567319 (+) True G46016
TU57380 lncRNA downstream 37924 38588879 ~ 38590159 (+) True G46034
TU57381 lncRNA downstream 39800 38590755 ~ 38621343 (+) True G46035
TU57394 lncRNA downstream 94323 38645278 ~ 38673471 (+) False AMCG00013665
TU57375 lncRNA downstream 105641 38656596 ~ 38699232 (+) False AMCG00013672
AMCG00013649 mRNA upstream 67630 38476967 ~ 38478698 (+) True AMCG00013649
AMCG00013648 mRNA upstream 77432 38467532 ~ 38468896 (+) True AMCG00013648
AMCG00013647 mRNA upstream 87545 38451789 ~ 38458783 (+) True AMCG00013647
AMCG00013646 mRNA upstream 147561 38382469 ~ 38398767 (+) True AMCG00013646
AMCG00013640 mRNA upstream 193166 38345817 ~ 38353162 (+) True AMCG00013640
AMCG00013654 mRNA downstream 13534 38564489 ~ 38566281 (+) True AMCG00013654
AMCG00013656 mRNA downstream 27308 38578263 ~ 38580971 (+) True AMCG00013656
AMCG00013671 mRNA downstream 57095 38608050 ~ 38612189 (+) True AMCG00013671
AMCG00013665 mRNA downstream 100979 38651934 ~ 38672626 (+) True AMCG00013665
AMCG00013664 mRNA downstream 132044 38682999 ~ 38687808 (+) True AMCG00013664
TU57196 other upstream 173130 38370656 ~ 38373198 (+) True G45894
TU57149 other upstream 314998 38230566 ~ 38231330 (+) True G45850
TU57084 other upstream 487494 38054904 ~ 38058834 (+) False AMCG00013629
TU56759 other upstream 1225997 37315486 ~ 37320331 (+) False AMCG00013595
TU56708 other upstream 1425757 37113502 ~ 37120571 (+) False AMCG00013587
TU57357 other downstream 13543 38564498 ~ 38564994 (+) False AMCG00013654
TU57427 other downstream 268454 38819409 ~ 38821953 (+) False AMCG00013681
TU57658 other downstream 1011018 39561973 ~ 39562300 (+) True G46244
TU57778 other downstream 1799697 40350652 ~ 40373160 (+) False G46345
TU58194 other downstream 3877146 42428101 ~ 42441245 (+) False AMCG00013770

Expression Profile