RNA id: AMCG00013704


Basic Information

Item Value
RNA id AMCG00013704
length 288
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00013704
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39278797 ~ 39279591 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATGTGCGAGGTGATGCCGACCATAAACGAAGGGGACTCCATGAGTTCCCAACGGGGGTCCCAGAACGGCTCGGACCCCGACAGCAATTTCGAGCAGCTGATGGTCAACATGTTGGACGAGAGGGACAAACTGCTGGAATCGCTCCGGGAGACTCAGGAGACCCTGATTCAGACCCAGACCAAACTGCAGGACGTGGTCCATGAGAGGGACCTCCTCCAGAGACAGATCAATTCCGCCCTACCACAGGCTAGGGAAGAGAGCAAATCTGAGGAACCTCTGAATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU57522 lncRNA upstream 339286 38934463 ~ 38939511 (+) True G46138
TU57375 lncRNA upstream 579565 38656596 ~ 38699232 (+) False AMCG00013672
TU57394 lncRNA upstream 605326 38645278 ~ 38673471 (+) False AMCG00013665
TU57381 lncRNA upstream 657454 38590755 ~ 38621343 (+) True G46035
TU57380 lncRNA upstream 688638 38588879 ~ 38590159 (+) True G46034
TU57779 lncRNA downstream 1086875 40366466 ~ 40373800 (+) True G46345
TU57790 lncRNA downstream 1106443 40386034 ~ 40389941 (+) True AMCG00013729
TU57791 lncRNA downstream 1112297 40391888 ~ 40412672 (+) True G46355
TU57796 lncRNA downstream 1137041 40416632 ~ 40425507 (+) True G46360
TU57909 lncRNA downstream 1603258 40882849 ~ 40885629 (+) True G46455
AMCG00013693 mRNA upstream 45740 39227382 ~ 39233057 (+) True AMCG00013693
AMCG00013695 mRNA upstream 52799 39211389 ~ 39225998 (+) True AMCG00013695
AMCG00013694 mRNA upstream 100828 39170910 ~ 39177969 (+) True AMCG00013694
AMCG00013692 mRNA upstream 153694 39116613 ~ 39125103 (+) True AMCG00013692
AMCG00013683 mRNA upstream 434698 38831355 ~ 38844099 (+) True AMCG00013683
AMCG00013702 mRNA downstream 67299 39346890 ~ 39406693 (+) True AMCG00013702
AMCG00013708 mRNA downstream 249683 39529274 ~ 39540592 (+) True AMCG00013708
AMCG00013705 mRNA downstream 274368 39553959 ~ 39560813 (+) True AMCG00013705
AMCG00013707 mRNA downstream 323510 39603101 ~ 39627214 (+) True AMCG00013707
AMCG00013706 mRNA downstream 353600 39633191 ~ 39640768 (+) True AMCG00013706
TU57427 other upstream 456844 38819409 ~ 38821953 (+) False AMCG00013681
TU57357 other upstream 713803 38564498 ~ 38564994 (+) False AMCG00013654
TU57196 other upstream 905599 38370656 ~ 38373198 (+) True G45894
TU57149 other upstream 1047467 38230566 ~ 38231330 (+) True G45850
TU57084 other upstream 1219963 38054904 ~ 38058834 (+) False AMCG00013629
TU57658 other downstream 282382 39561973 ~ 39562300 (+) True G46244
TU57778 other downstream 1071061 40350652 ~ 40373160 (+) False G46345
TU58194 other downstream 3148510 42428101 ~ 42441245 (+) False AMCG00013770
TU58195 other downstream 3148510 42428101 ~ 42441245 (+) False AMCG00013770
TU58196 other downstream 3148510 42428101 ~ 42441245 (+) False AMCG00013770

Expression Profile