RNA id: AMCG00013721


Basic Information

Item Value
RNA id AMCG00013721
length 657
RNA type mRNA
GC content 0.54
exon number 2
gene id AMCG00013721
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39761180 ~ 39779054 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTCACCTACCGCACAACCCGTGCCATGTCCATCCCCCTTACCTTCCTGCTGAGCGCCTACCAGGGCGTCACCatcaccccctcctcctcccgtcTGTACAGCCTGAAGCCTTGGCTCTCGCGCTGCCTGCTGCCCCTCAGCCTCCTCTTCTGGCTTCTAGATGGGGGTACTTCCTACTCCAGCATCCTCTACACCAGCCAGATCCATAACATCACGTTCAGTGCACTCACACTCAACCTGGGCTACTGCCTGGTTGAGTTTCCTAGTGAGGAGTCCTACTTCGCCATTGGAGTTATGTCCCTCACCCGGGACACGTGTTTCATCCTTCTCATGGTGCTCTCCAGCCTCTACATCCTGCTCATTCTCTACCAGCACTGTAAGAGAGCAAAAGGAATCCGCAGCTCTGTCCAGAGTCAGGGCTCATCGGCCGAGAATCGGGCGGCTAAGACTGTGGTCACCCTGATCACCGTGTATGTTATATTTTTTGGGATTGACAACCTGATTTGGGCGTACACTGTTACTATTGGGAAAGTGCCAGTGGTCATGAATGACGTGCGTGTTTTCTTCTCCACTCTCTATGCCACCGTCTGCCCAGTAGTTGTGATCGTGTCCAACAAGAGGGTGAACCGGAAGCTTCGCTGTGACAAAAACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU57522 lncRNA upstream 821669 38934463 ~ 38939511 (+) True G46138
TU57375 lncRNA upstream 1061948 38656596 ~ 38699232 (+) False AMCG00013672
TU57394 lncRNA upstream 1087709 38645278 ~ 38673471 (+) False AMCG00013665
TU57381 lncRNA upstream 1139837 38590755 ~ 38621343 (+) True G46035
TU57380 lncRNA upstream 1171021 38588879 ~ 38590159 (+) True G46034
TU57779 lncRNA downstream 587412 40366466 ~ 40373800 (+) True G46345
TU57790 lncRNA downstream 606980 40386034 ~ 40389941 (+) True AMCG00013729
TU57791 lncRNA downstream 612834 40391888 ~ 40412672 (+) True G46355
TU57796 lncRNA downstream 637578 40416632 ~ 40425507 (+) True G46360
TU57909 lncRNA downstream 1103795 40882849 ~ 40885629 (+) True G46455
AMCG00013719 mRNA upstream 6475 39753734 ~ 39754705 (+) True AMCG00013719
AMCG00013712 mRNA upstream 15657 39737727 ~ 39745523 (+) True AMCG00013712
AMCG00013711 mRNA upstream 29066 39716967 ~ 39732114 (+) True AMCG00013711
AMCG00013706 mRNA upstream 120412 39633191 ~ 39640768 (+) True AMCG00013706
AMCG00013707 mRNA upstream 133966 39603101 ~ 39627214 (+) True AMCG00013707
AMCG00013724 mRNA downstream 165 39779219 ~ 39780190 (+) True AMCG00013724
AMCG00013720 mRNA downstream 10578 39789632 ~ 39897168 (+) True AMCG00013720
AMCG00013725 mRNA downstream 332740 40111794 ~ 40120125 (+) True AMCG00013725
AMCG00013727 mRNA downstream 404881 40183935 ~ 40271437 (+) True AMCG00013727
AMCG00013726 mRNA downstream 548844 40327898 ~ 40341318 (+) True AMCG00013726
TU57658 other upstream 198880 39561973 ~ 39562300 (+) True G46244
TU57427 other upstream 939227 38819409 ~ 38821953 (+) False AMCG00013681
TU57357 other upstream 1196186 38564498 ~ 38564994 (+) False AMCG00013654
TU57196 other upstream 1387982 38370656 ~ 38373198 (+) True G45894
TU57149 other upstream 1529850 38230566 ~ 38231330 (+) True G45850
TU57778 other downstream 571598 40350652 ~ 40373160 (+) False G46345
TU58194 other downstream 2649047 42428101 ~ 42441245 (+) False AMCG00013770
TU58195 other downstream 2649047 42428101 ~ 42441245 (+) False AMCG00013770
TU58196 other downstream 2649047 42428101 ~ 42441245 (+) False AMCG00013770
TU58242 other downstream 2865933 42644987 ~ 42648754 (+) True G46723