RNA id: AMCG00013734


Basic Information

Item Value
RNA id AMCG00013734
length 342
RNA type mRNA
GC content 0.67
exon number 2
gene id AMCG00013734
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 40475025 ~ 40478788 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCCAAGAcgctgaagaagaagaagcactGGTCCAGCAAAGTGCAGGAGTGCGCCGTGTCCTGGGGCAGCGCCGGGGACTTCGGCTCCGTGGTGGAGGTGCTGGGGGGAGCGGAGCGCGGCGAGTTCCCGCACCTGGGCCAGGTGAAGCTGGAGGCGGTGCTGTGCCAGGCCGGGAAGCTGCCCGGCCCGGGGGACGTCCTGCTGGAGGTCAACGGCACCCCGGTCAGCGGGCTGACGAACCGCGACACGCTGGCGGTCATCCGGCACTTCCGAGAGCCCATCCGCCTGAAGACCGTTAAGCCAGCGACCCCAGTTGAGATGCAAGGAGAAGCCGTGTAA

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU57796 lncRNA upstream 49518 40416632 ~ 40425507 (+) True G46360
TU57791 lncRNA upstream 62353 40391888 ~ 40412672 (+) True G46355
TU57790 lncRNA upstream 85084 40386034 ~ 40389941 (+) True AMCG00013729
TU57779 lncRNA upstream 101225 40366466 ~ 40373800 (+) True G46345
TU57522 lncRNA upstream 1535514 38934463 ~ 38939511 (+) True G46138
TU57909 lncRNA downstream 404061 40882849 ~ 40885629 (+) True G46455
TU57981 lncRNA downstream 724276 41203064 ~ 41204149 (+) True G46508
TU58024 lncRNA downstream 934572 41413360 ~ 41413600 (+) True G46538
TU58160 lncRNA downstream 1366520 41845308 ~ 41893174 (+) True G46652
TU58217 lncRNA downstream 2016958 42495746 ~ 42499599 (+) True G46701
AMCG00013728 mRNA upstream 7212 40445649 ~ 40467813 (+) True AMCG00013728
AMCG00013729 mRNA upstream 86702 40377732 ~ 40388323 (+) False AMCG00013729
AMCG00013726 mRNA upstream 133707 40327898 ~ 40341318 (+) True AMCG00013726
AMCG00013727 mRNA upstream 203588 40183935 ~ 40271437 (+) True AMCG00013727
AMCG00013725 mRNA upstream 354900 40111794 ~ 40120125 (+) True AMCG00013725
AMCG00013731 mRNA downstream 76889 40555677 ~ 40604675 (+) True AMCG00013731
AMCG00013735 mRNA downstream 132048 40610836 ~ 40622089 (+) True AMCG00013735
AMCG00013736 mRNA downstream 184797 40663585 ~ 40665746 (+) True AMCG00013736
AMCG00013739 mRNA downstream 366924 40845712 ~ 40850185 (+) True AMCG00013739
AMCG00013740 mRNA downstream 553304 41032092 ~ 41036684 (+) True AMCG00013740
TU57778 other upstream 101865 40350652 ~ 40373160 (+) False G46345
TU57658 other upstream 912725 39561973 ~ 39562300 (+) True G46244
TU57427 other upstream 1653072 38819409 ~ 38821953 (+) False AMCG00013681
TU57357 other upstream 1910031 38564498 ~ 38564994 (+) False AMCG00013654
TU57196 other upstream 2101827 38370656 ~ 38373198 (+) True G45894
TU58194 other downstream 1949313 42428101 ~ 42441245 (+) False AMCG00013770
TU58195 other downstream 1949313 42428101 ~ 42441245 (+) False AMCG00013770
TU58196 other downstream 1949313 42428101 ~ 42441245 (+) False AMCG00013770
TU58242 other downstream 2166199 42644987 ~ 42648754 (+) True G46723
TU58393 other downstream 2561196 43039984 ~ 43044436 (+) True G46840

Expression Profile