RNA id: AMCG00013759


Basic Information

Item Value
RNA id AMCG00013759
length 1503
RNA type mRNA
GC content 0.47
exon number 7
gene id AMCG00013759
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 41621764 ~ 41637225 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGATTGGAGATTCCTGTTTAAGGGCTTGACTCCAACAGGAGAAATGGAGACCAATACACAATCCTGTCTGCTGACCAATCACACAGTGGGGAATATACCTGTAGAGGGGAACAGAAAATACATCCATTATATTCTACACTCGACCTCAGGCTGTGCTGACCCTGCAGTCTGGATGGACAGAGATATTCAGGGCAGTTCTACTGAGTGGATCTATAAATGGTACAGAGATGGACAGGAGCTTCCTGTTGACAAGGCTGACACCAGCAGTAGAGATGGAAACAGATACACAATCCTCTCTGCTGCTCCCTCACACAGTGGGCAATATACCTGTAGAGGGCAACAAGAGAGACCATCAGTTTACATCACAGTCAGCCATCCTGTTACACTGAAGggaacaGCACTGCCCAACACTGACAGCAGCAGGACTGATGGGTCCAGTTACACCATCAGCCAGGCGGTTCTGTCCCACAGTGGACAGTACTGGTGTCGAGCTACAAGGGGCAGGGTATCCTTTCACTCTCAGTATAGTGATGTTCTGCACTTAAATGTGTCAACTCAACCTCAGGCCGTGCTGACTCTGGAGTCTGGATGTACAGAGATATTCACTACAGATAGTCTGACATTGAGGAGTGATGTGGAGTGGAACTACACATGGTACAGAGATGGGCAGGAACTTCTCCACAACCACACTGACATCAGCAGTGGAAATGGAGAGAGATATGTCTTCAACTCTGCAGTTGAATCACAGAGTGTTGAATATACTTGCAGATGGGAAAGGATACCCAAACCCACTTACTCATTAAAGAGGGGATCTCTTATACCAAAGGATATCAGTGAgtcactgctttattttcaatttgtgaTATGGAGTGAAACTACACATGGTACAGAGGTGGCCAGCAGCTTCCTCAAGACTTATGTATTGGAAACAGTTGTGCTGACTGTAGAGCCCCCATGGACAGAGGTGTACCCAGGAGACACAGTCACCCTGAGCTGTCAGGTTAGGGGCTCTGAGATAGACGACTGGGAATATGTCTGGATCATAGAAACGCAGGGAAAATTGCAAGAATTGAAAAGCTACACTGGTGAAGGACACTCCAAATATCAACTGCGCCATGTCAGACCATCTGATAGTGGACAGTACTGGTGTCAGGCTGagcatggaaaagagaagatcAGGAGTGACCCTCATACACTGAGAGTGTCAGCTCAACCTCAGGCCGTGCTGACTCTGGAGTCTGGATGTACAGAGATATTCACTACAGACAGTCTGACATTGAGGTGTGCGGTTCAGGGCAGTGATGTGGAGTGGAACTACACATGGTACAGAGATGGGCAGGAGCTTCTCCACAACCACACTGACTTCAGCAGtggaaatggagagagaaatgTCTTCAGCTCTCCAGTTGAATCACAGAGTGCTGCATATACTTGCAGAGGGGAAAGGATATCCAAACCCACTTACTCATTAAAGAGTGATGCTCTAATACCAAAGGATATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU58024 lncRNA upstream 208164 41413360 ~ 41413600 (+) True G46538
TU57981 lncRNA upstream 417615 41203064 ~ 41204149 (+) True G46508
TU57909 lncRNA upstream 736135 40882849 ~ 40885629 (+) True G46455
TU57796 lncRNA upstream 1196257 40416632 ~ 40425507 (+) True G46360
TU57791 lncRNA upstream 1209092 40391888 ~ 40412672 (+) True G46355
TU58160 lncRNA downstream 208083 41845308 ~ 41893174 (+) True G46652
TU58217 lncRNA downstream 858521 42495746 ~ 42499599 (+) True G46701
TU58243 lncRNA downstream 1012965 42650190 ~ 42654992 (+) False AMCG00013777
TU58253 lncRNA downstream 1054981 42692206 ~ 42692546 (+) True G46730
TU58257 lncRNA downstream 1056437 42693662 ~ 42695623 (+) True G46734
AMCG00013755 mRNA upstream 16821 41594817 ~ 41604943 (+) True AMCG00013755
AMCG00013756 mRNA upstream 33825 41573978 ~ 41587939 (+) True AMCG00013756
AMCG00013760 mRNA upstream 69194 41549426 ~ 41552570 (+) True AMCG00013760
AMCG00013758 mRNA upstream 117297 41484312 ~ 41504467 (+) True AMCG00013758
AMCG00013753 mRNA upstream 138388 41467032 ~ 41483376 (+) True AMCG00013753
AMCG00013761 mRNA downstream 127519 41764744 ~ 41787394 (+) True AMCG00013761
AMCG00013770 mRNA downstream 791552 42428777 ~ 42446480 (+) True AMCG00013770
AMCG00013771 mRNA downstream 840446 42477671 ~ 42487364 (+) True AMCG00013771
AMCG00013774 mRNA downstream 918583 42555808 ~ 42569579 (+) True AMCG00013774
AMCG00013777 mRNA downstream 1017767 42654992 ~ 42661844 (+) True AMCG00013777
TU57778 other upstream 1248604 40350652 ~ 40373160 (+) False G46345
TU57658 other upstream 2059464 39561973 ~ 39562300 (+) True G46244
TU57427 other upstream 2799811 38819409 ~ 38821953 (+) False AMCG00013681
TU57357 other upstream 3056770 38564498 ~ 38564994 (+) False AMCG00013654
TU57196 other upstream 3248566 38370656 ~ 38373198 (+) True G45894
TU58194 other downstream 790876 42428101 ~ 42441245 (+) False AMCG00013770
TU58195 other downstream 790876 42428101 ~ 42441245 (+) False AMCG00013770
TU58196 other downstream 790876 42428101 ~ 42441245 (+) False AMCG00013770
TU58242 other downstream 1007762 42644987 ~ 42648754 (+) True G46723
TU58393 other downstream 1402759 43039984 ~ 43044436 (+) True G46840

Expression Profile