RNA id: AMCG00013760



Basic Information


Item Value
RNA id AMCG00013760
length 615
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00013760
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 41549426 ~ 41552570 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCTAATTCAATTTTACAAACGTTTCCAGGCTCCAGGCCTCAGGCTGTGCTGACTGCAGATCCTCCATGGACAGAGCTGTACACCGGAGAGACAGTCACCCTGAGGTGTCAGGTTAGGGGCTCTGGTGGCTGGAAATACTCCTGGGCATTAAATAAAGATGGGAGAATGGAGATTATCAAGATGACCAGTGGGCAGGATGGATCCCATTACATCCTGAGCCCTGTATCAGTGACTGATAGTGGGCAGTACTGGTGTCAAGGTGCAAGAGGAGATGAACAGAGTGACAGTGCTAATCTCGTTATAACAGTGATGGccTACATGCctcaggctgtggtcactgtaGATCCCTCAGACACTGTGATTTCAGGAGAAACAGTCACGCTGCACTGTAGTGTTGGTAAAGTATCTGCTGGCTGGAAATACTCCTGGGCAAGACAGACAGATGCACTGGGTATATTGGAAAGCCTCACCAGGTCCAGTACTGAAGACCAGCAGCAGTACAGCCTTGGACCTGTGACAGTGTCTGATAGCGGACAGTTCTTGTGTCAGGCTGAAAGAGTCAACAGTCACCGTCTCCAGAGTTTGCCTGGTGCTGTCATTGTGAAAGTGTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU58024 lncRNA upstream 135826 41413360 ~ 41413600 (+) True G46538
TU57981 lncRNA upstream 345277 41203064 ~ 41204149 (+) True G46508
TU57909 lncRNA upstream 663797 40882849 ~ 40885629 (+) True G46455
TU57796 lncRNA upstream 1123919 40416632 ~ 40425507 (+) True G46360
TU57791 lncRNA upstream 1136754 40391888 ~ 40412672 (+) True G46355
TU58160 lncRNA downstream 292738 41845308 ~ 41893174 (+) True G46652
TU58217 lncRNA downstream 943176 42495746 ~ 42499599 (+) True G46701
TU58243 lncRNA downstream 1097620 42650190 ~ 42654992 (+) False AMCG00013777
TU58253 lncRNA downstream 1139636 42692206 ~ 42692546 (+) True G46730
TU58257 lncRNA downstream 1141092 42693662 ~ 42695623 (+) True G46734
AMCG00013758 mRNA upstream 44959 41484312 ~ 41504467 (+) True AMCG00013758
AMCG00013753 mRNA upstream 66050 41467032 ~ 41483376 (+) True AMCG00013753
AMCG00013754 mRNA upstream 86470 41453187 ~ 41462956 (+) True AMCG00013754
AMCG00013757 mRNA upstream 125091 41416140 ~ 41424335 (+) True AMCG00013757
AMCG00013746 mRNA upstream 351763 41176661 ~ 41197663 (+) True AMCG00013746
AMCG00013756 mRNA downstream 21408 41573978 ~ 41587939 (+) True AMCG00013756
AMCG00013755 mRNA downstream 42247 41594817 ~ 41604943 (+) True AMCG00013755
AMCG00013759 mRNA downstream 69194 41621764 ~ 41637225 (+) True AMCG00013759
AMCG00013761 mRNA downstream 212174 41764744 ~ 41787394 (+) True AMCG00013761
AMCG00013770 mRNA downstream 876207 42428777 ~ 42446480 (+) True AMCG00013770
TU57778 other upstream 1176266 40350652 ~ 40373160 (+) False G46345
TU57658 other upstream 1987126 39561973 ~ 39562300 (+) True G46244
TU57427 other upstream 2727473 38819409 ~ 38821953 (+) False AMCG00013681
TU57357 other upstream 2984432 38564498 ~ 38564994 (+) False AMCG00013654
TU57196 other upstream 3176228 38370656 ~ 38373198 (+) True G45894
TU58194 other downstream 875531 42428101 ~ 42441245 (+) False AMCG00013770
TU58195 other downstream 875531 42428101 ~ 42441245 (+) False AMCG00013770
TU58196 other downstream 875531 42428101 ~ 42441245 (+) False AMCG00013770
TU58242 other downstream 1092417 42644987 ~ 42648754 (+) True G46723
TU58393 other downstream 1487414 43039984 ~ 43044436 (+) True G46840

Expression Profile