RNA id: AMCG00013838



Basic Information


Item Value
RNA id AMCG00013838
length 300
RNA type mRNA
GC content 0.66
exon number 3
gene id AMCG00013838
representative False

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45034772 ~ 45095669 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CAGCTGGCAGTGGGGACCTGCGAGATCGTCATGCTGAATCGGGACAGCAGCCAGCCCCGCAGGACCATCGCCCGGCAGACCGCCCGCTGCGCCTGTCGGAGGGGGCAGATCGCGGGAACCACACGGGCCAGGCCTGCCTGTGTAGACGCACGCATAGTGAAGAACAAGCAGTGGTGTGAGATGGCGCCATGCTCGGAGGGAGAGATCTGCGGGCTGCTCATGAACCGCTCGGGCTGGACGTGCACCAAGGGGGGTGGCAGGATAAAGACCGTCACGGCCCCGATTCGGTCCAGCTCATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU58802 lncRNA upstream 95624 44961609 ~ 44963472 (+) True G47158
TU58736 lncRNA upstream 729549 44329293 ~ 44329547 (+) True G47110
TU58733 lncRNA upstream 760432 44298269 ~ 44298664 (+) True G47107
TU58732 lncRNA upstream 767300 44289057 ~ 44291796 (+) True G47106
TU58703 lncRNA upstream 835695 44222408 ~ 44223401 (+) True G47080
TU58832 lncRNA downstream 202534 45268054 ~ 45268386 (+) True G47184
TU58834 lncRNA downstream 214234 45279754 ~ 45281095 (+) True G47186
TU58836 lncRNA downstream 217872 45283392 ~ 45283600 (+) True G47188
TU58837 lncRNA downstream 218320 45283840 ~ 45284159 (+) True G47189
TU58838 lncRNA downstream 220996 45286516 ~ 45286853 (+) True G47190
AMCG00013840 mRNA upstream 118935 44933300 ~ 44940161 (+) True AMCG00013840
AMCG00013839 mRNA upstream 139835 44901032 ~ 44919261 (+) True AMCG00013839
AMCG00013837 mRNA upstream 362325 44695779 ~ 44696771 (+) True AMCG00013837
AMCG00013834 mRNA upstream 397458 44635479 ~ 44661638 (+) True AMCG00013834
AMCG00013833 mRNA upstream 528269 44529718 ~ 44530827 (+) True AMCG00013833
AMCG00013841 mRNA downstream 281087 45346607 ~ 45353929 (+) True AMCG00013841
AMCG00013849 mRNA downstream 354393 45419913 ~ 45431617 (+) True AMCG00013849
AMCG00013848 mRNA downstream 377566 45443086 ~ 45456185 (+) True AMCG00013848
AMCG00013851 mRNA downstream 425217 45490737 ~ 45494667 (+) True AMCG00013851
AMCG00013850 mRNA downstream 486453 45551973 ~ 45569316 (+) True AMCG00013850
TU58527 other upstream 1618398 43438492 ~ 43440698 (+) True G46945
TU58419 other upstream 1969453 43087289 ~ 43089643 (+) True G46862
TU58393 other upstream 2014660 43039984 ~ 43044436 (+) True G46840
TU58242 other upstream 2410342 42644987 ~ 42648754 (+) True G46723
TU58196 other upstream 2617851 42428101 ~ 42441245 (+) False AMCG00013770
TU58857 other downstream 261138 45326658 ~ 45360882 (+) True G47206
TU59011 other downstream 750852 45816372 ~ 45817955 (+) False AMCG00013872
TU59106 other downstream 869139 45934659 ~ 45941906 (+) True G47398
TU59522 other downstream 2004181 47069701 ~ 47073708 (+) False AMCG00013919
TU59915 other downstream 3182547 48248067 ~ 48249713 (+) False AMCG00013961

Expression Profile