RNA id: AMCG00013851


Basic Information

Item Value
RNA id AMCG00013851
length 276
RNA type mRNA
GC content 0.49
exon number 4
gene id AMCG00013851
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45490737 ~ 45494667 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGCCGAGTGTCAGAAAGCCTGGCTGAACATACTGTCGATATTTATCAGTTTGGAAGAACTGAAGTGATTGACAACACGCTCAACCCCGACTTCGTCAGGAAATACATCCTGGACTACTTCTTTGAGGAGAAGCAGAATCTTCGCTTTGACTTatATGATGTGGATTCTAAGAGCCCTGATCTCTCTAAACATGACTTTCTGGGCCAGACCTTTTGCACCCTGGGAGAGATCGTGGGCTCCCCGGCCAGCCGTCTGGAGAAACCCCTGAggtga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU58844 lncRNA upstream 136323 45295503 ~ 45354414 (+) False G47194
TU58842 lncRNA upstream 192562 45295503 ~ 45298175 (+) True G47194
TU58840 lncRNA upstream 197837 45291273 ~ 45292900 (+) True G47192
TU58838 lncRNA upstream 203884 45286516 ~ 45286853 (+) True G47190
TU58837 lncRNA upstream 206578 45283840 ~ 45284159 (+) True G47189
TU58890 lncRNA downstream 74742 45569409 ~ 45574313 (+) True G47232
TU58917 lncRNA downstream 121466 45616133 ~ 45620232 (+) False G47255
TU58920 lncRNA downstream 121466 45616133 ~ 45619070 (+) True G47255
TU58924 lncRNA downstream 127920 45622587 ~ 45622806 (+) True G47258
TU58928 lncRNA downstream 129705 45624372 ~ 45624571 (+) True G47262
AMCG00013848 mRNA upstream 34552 45443086 ~ 45456185 (+) True AMCG00013848
AMCG00013849 mRNA upstream 59120 45419913 ~ 45431617 (+) True AMCG00013849
AMCG00013841 mRNA upstream 136808 45346607 ~ 45353929 (+) True AMCG00013841
AMCG00013838 mRNA upstream 425217 45059096 ~ 45065520 (+) False AMCG00013838
AMCG00013840 mRNA upstream 550576 44933300 ~ 44940161 (+) True AMCG00013840
AMCG00013850 mRNA downstream 57306 45551973 ~ 45569316 (+) True AMCG00013850
AMCG00013854 mRNA downstream 104056 45598723 ~ 45602192 (+) True AMCG00013854
AMCG00013853 mRNA downstream 133720 45628387 ~ 45633476 (+) True AMCG00013853
AMCG00013855 mRNA downstream 140445 45635112 ~ 45636569 (+) True AMCG00013855
AMCG00013852 mRNA downstream 158686 45653353 ~ 45656372 (+) True AMCG00013852
TU58857 other upstream 129855 45326658 ~ 45360882 (+) True G47206
TU58815 other upstream 395068 45034772 ~ 45095669 (+) True AMCG00013838
TU58527 other upstream 2050039 43438492 ~ 43440698 (+) True G46945
TU58419 other upstream 2401094 43087289 ~ 43089643 (+) True G46862
TU58393 other upstream 2446301 43039984 ~ 43044436 (+) True G46840
TU59011 other downstream 321705 45816372 ~ 45817955 (+) False AMCG00013872
TU59106 other downstream 439992 45934659 ~ 45941906 (+) True G47398
TU59522 other downstream 1575034 47069701 ~ 47073708 (+) False AMCG00013919
TU59915 other downstream 2753400 48248067 ~ 48249713 (+) False AMCG00013961
TU59923 other downstream 2759627 48254294 ~ 48255821 (+) False AMCG00013961

Expression Profile