Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013870 |
| length | 1467 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 14 |
| gene id | AMCG00013870 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 45855452 ~ 45876895 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0031231 | intrinsic component of peroxisomal membrane | cellular_component |
| GO:0005777 | peroxisome | cellular_component |
| GO:0005778 | peroxisomal membrane | cellular_component |
| GO:0005779 | integral component of peroxisomal membrane | cellular_component |
| GO:0044438 | obsolete microbody part | cellular_component |
| GO:0044439 | obsolete peroxisomal part | cellular_component |
| GO:0031903 | microbody membrane | cellular_component |
| GO:0042579 | microbody | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU58997 | lncRNA | upstream | 683 | 45851095 ~ 45854769 (+) | True | G47322 |
| TU58998 | lncRNA | upstream | 683 | 45851095 ~ 45854769 (+) | False | G47322 |
| TU58999 | lncRNA | upstream | 683 | 45851095 ~ 45854769 (+) | False | G47322 |
| TU59015 | lncRNA | upstream | 28800 | 45826312 ~ 45826652 (+) | True | G47336 |
| TU59012 | lncRNA | upstream | 32224 | 45818951 ~ 45823228 (+) | True | AMCG00013872 |
| TU59087 | lncRNA | downstream | 24972 | 45901867 ~ 45903185 (+) | True | G47383 |
| TU59091 | lncRNA | downstream | 29207 | 45906102 ~ 45906399 (+) | True | G47387 |
| TU59094 | lncRNA | downstream | 44245 | 45921140 ~ 45921898 (+) | True | G47390 |
| TU59104 | lncRNA | downstream | 66676 | 45943571 ~ 45947856 (+) | False | AMCG00013879 |
| TU59322 | lncRNA | downstream | 419738 | 46296633 ~ 46302869 (+) | True | G47546 |
| AMCG00013871 | mRNA | upstream | 9316 | 45833821 ~ 45846136 (+) | True | AMCG00013871 |
| AMCG00013872 | mRNA | upstream | 34313 | 45816653 ~ 45821139 (+) | False | AMCG00013872 |
| AMCG00013869 | mRNA | upstream | 52641 | 45800918 ~ 45802811 (+) | True | AMCG00013869 |
| AMCG00013873 | mRNA | upstream | 56511 | 45793535 ~ 45798941 (+) | True | AMCG00013873 |
| AMCG00013863 | mRNA | upstream | 114910 | 45720220 ~ 45740542 (+) | True | AMCG00013863 |
| AMCG00013868 | mRNA | downstream | 1203 | 45878098 ~ 45885313 (+) | True | AMCG00013868 |
| AMCG00013878 | mRNA | downstream | 12400 | 45889295 ~ 45893895 (+) | True | AMCG00013878 |
| AMCG00013881 | mRNA | downstream | 18252 | 45895147 ~ 45901581 (+) | True | AMCG00013881 |
| AMCG00013879 | mRNA | downstream | 66817 | 45943712 ~ 45959194 (+) | True | AMCG00013879 |
| AMCG00013880 | mRNA | downstream | 99333 | 45976228 ~ 45978644 (+) | True | AMCG00013880 |
| TU59011 | other | upstream | 37497 | 45816372 ~ 45817955 (+) | False | AMCG00013872 |
| TU58857 | other | upstream | 494570 | 45326658 ~ 45360882 (+) | True | G47206 |
| TU58815 | other | upstream | 759783 | 45034772 ~ 45095669 (+) | True | AMCG00013838 |
| TU58527 | other | upstream | 2414754 | 43438492 ~ 43440698 (+) | True | G46945 |
| TU58419 | other | upstream | 2765809 | 43087289 ~ 43089643 (+) | True | G46862 |
| TU59106 | other | downstream | 57764 | 45934659 ~ 45941906 (+) | True | G47398 |
| TU59522 | other | downstream | 1192806 | 47069701 ~ 47073708 (+) | False | AMCG00013919 |
| TU59915 | other | downstream | 2371172 | 48248067 ~ 48249713 (+) | False | AMCG00013961 |
| TU59923 | other | downstream | 2377399 | 48254294 ~ 48255821 (+) | False | AMCG00013961 |
| TU59933 | other | downstream | 2391859 | 48268754 ~ 48269272 (+) | True | G48018 |
