RNA id: AMCG00013905


Basic Information

Item Value
RNA id AMCG00013905
length 1560
RNA type mRNA
GC content 0.64
exon number 1
gene id AMCG00013905
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 46384682 ~ 46386241 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAAGGACAACCACCCGCTGGGCAGCCGCGGCGGGCAGGTGACGGTCAAGCACCTGTACCAGGACTCCAACAGGAAGCCCAACGGCGTGGCGCAGCACAACGGCTCCCACGCGTCTGCCAAGCCCCTGCCGGCCCTGTCCAAGGAGCGGAGCGTGGACAGCAGCGGCTCGGCCAAGTCCGGCGATGGCAAGTCCTCGAAGCCGGGCCCCCTGACCCCGGAGCAGGCCCTCAAACAGCACCGCCAGCAGCTGACCTCCCTGGAGCAGCAGGAGATCTACAACTACCCTGAGATCTACTTCGTGGGACCAAACGCCAAGAAGCGGACGGCTGTGGCGGGGGGCTCCAACAACGGGGGCTTCGACGACGACCAGGGCGGCTACATCCATGTGCCCCACGACCACCTGGCCTACCGCTACGAGTTCCTCAAGGTCATCGGCAAGGGCAGCTTCGGCCAGGTGGCCAAGGTCTATGACCACAAGACGCACCAGCAGCTGGCGCTGAAGATGGTGCGCAATGAGAAGCGCTTCCACCGGCAGGCGGCCGAGGAGATCCGCATCCTGGAGCACCTGAGGAAGCAGGACAAGATGGGGGGCATGAACGTGGTACACATGCTGGAGAACTTCACCTTCCGCAACCACATCTGCATGACCTTTGAGCTGCTTAGCATGAACCTGTACGAGCTCATCAAGAGGAACAAGTTCCAGGGCTTCAGCCTGCCGCTGGTGCGCAAGTTCGCTCACTCCATCCTGCAGTGCCTGGAGGCGCTGCACCGCAACAAGATTATCCACTGTGACCTGAAGCCCGAGAACATCCTACTCAAGCAGCAGGGCCGCAGCGGCATCAAGGTCATCGACTTCGGCTCCAGCTGCTTCGAGCACCAGCGCGTCTACACCTACATCCAGTCGCGCTTCTACCGGGCGCCCGAGGTCATCCTGGGCTCGCGCTACGGCATGCCCATCGACATGTGGAGTTTCGGCTGCATCCTGGCCGAGCTGCTGACCGGCTACCCGTTGTTCCCCGGCGAGGACGAGGGCGACCAACTGGCCTGCATGATGGAGCTGCTGGGCGCGCCTCCGCCGAAGCTGCTGGAGCAGTCCAAGCGCGCCAAGAACTTCGTCAACTCCAAGGGCCACCCGCGCTACTGCACCGCCAGCACGCTGGGCAACGGCTCTGTGGTCTTGAACGGCAGCCGCTCGCGGCGGGGCAAGATGAGGGGCCCGCCGGCCAGCAAGGAGTGGGCGACGGCGCTCAAGGGCTGCGACGACCCCACGTTCACCGACTTCCTGAAGAAGTGCCTGGACTGGGACCCCACCAGCCGTATCACCCCGGCCCAGGCGCTGAGGCACCCCTGGCTGTACAAGCGCCTGCCCAAGCCCATCACCGGGGAGAGGAGCCTGGTGCCCAAGAGGATTACGGACCATGGCACGTCCTTCCCGGGCATTATTTCCAAGCTGCCCCCGCCGATCGGGGCAGCCAACAACAAACTGCGGACCAACATTTTGGGGGACTCGGGCAGCAGTATACCGCTGCGCACCGTGCTGCCCAAACTGGTGTCCTAG

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K18669 DYRK2_3_4; dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU59342 lncRNA downstream 81982 46299161 ~ 46302700 (-) True AMCG00013903
TU59313 lncRNA downstream 146168 46231325 ~ 46238514 (-) True G47538
TU59095 lncRNA downstream 461768 45921106 ~ 45922914 (-) True G47391
TU59096 lncRNA downstream 461812 45921106 ~ 45922870 (-) False G47391
TU59058 lncRNA downstream 529882 45845849 ~ 45854800 (-) True G47365
TU59468 lncRNA upstream 417370 46803611 ~ 46838764 (-) True G47661
TU59536 lncRNA upstream 671298 47057539 ~ 47120601 (-) True G47718
TU59534 lncRNA upstream 685102 47071343 ~ 47075028 (-) True G47717
TU59609 lncRNA upstream 839560 47225801 ~ 47227254 (-) True G47766
TU59662 lncRNA upstream 1109170 47495411 ~ 47495684 (-) True G47807
AMCG00013903 mRNA downstream 73564 46302526 ~ 46311118 (-) False AMCG00013903
AMCG00013898 mRNA downstream 282066 46094540 ~ 46102616 (-) True AMCG00013898
AMCG00013891 mRNA downstream 296904 46087083 ~ 46087778 (-) True AMCG00013891
AMCG00013890 mRNA downstream 301368 46075764 ~ 46083314 (-) False AMCG00013890
AMCG00013888 mRNA downstream 310254 46050593 ~ 46074428 (-) True AMCG00013888
AMCG00013908 mRNA upstream 1913 46388154 ~ 46389618 (-) True AMCG00013908
AMCG00013907 mRNA upstream 18583 46404824 ~ 46406931 (-) True AMCG00013907
AMCG00013906 mRNA upstream 65823 46452064 ~ 46465408 (-) True AMCG00013906
AMCG00013910 mRNA upstream 84130 46470371 ~ 46507717 (-) True AMCG00013910
AMCG00013914 mRNA upstream 544334 46930575 ~ 46946388 (-) True AMCG00013914
TU59251 other downstream 221195 46160539 ~ 46163487 (-) True G47501
TU59204 other downstream 301140 46075429 ~ 46083542 (-) True AMCG00013890
TU59142 other downstream 410371 45963891 ~ 45974311 (-) True AMCG00013883
TU59115 other downstream 460334 45923922 ~ 45924348 (-) False AMCG00013882
TU58927 other downstream 760787 45623238 ~ 45623895 (-) True G47261
TU59474 other upstream 485628 46871869 ~ 46875370 (-) True G47666
TU59572 other upstream 812102 47198343 ~ 47200897 (-) False AMCG00013932
TU59752 other upstream 1478609 47864850 ~ 47868863 (-) True AMCG00013946
TU59777 other upstream 1581184 47967425 ~ 47974915 (-) True G47896
TU60179 other upstream 2431742 48817983 ~ 48821156 (-) False AMCG00013991

Expression Profile