RNA id: AMCG00013937


Basic Information

Item Value
RNA id AMCG00013937
length 1008
RNA type mRNA
GC content 0.62
exon number 2
gene id AMCG00013937
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 47567103 ~ 47571775 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGACCCCGGAGACGCGGCCCTGGACCCCCTGGACTTGGCCTACCTGGCGGCCGAGGCCTGCATCGCCCTGGCCTCTCTGCTGGGCAACGCGCTGGTGGTGTGGGCGGTCAAGCTGAACCAGGCTCTGCGGGACACCACCTTCTACCTCATCGTGTCCCTGGCCGTGGCGGACATCGCCGTGGGCGCAGTGGCCATCCCCGTCGCCATGCTCATCAGCCTGGGGGTCCGCATGCCCTTCCACGCCTGCCTGCTGGGCTGCTGCCTGCTGTGCGTGCTGACGCAGTGCTCCATCCTGTCGCTGCTGGCCATCGCGGTGGACCGGTACCTGCGCGTCAGGACGCCCGTCCGGTACCGCTCCATGATGGACACCCGCTGCGCCTGCCTGGCGGTGGCAGTCTGTTGGGTTCTGCCAACTATCTTGGGTTTGCTGCCCATGTTGGGCTGGAACAACAGAGCCAATCTGAAGGACCTGGACCAGCCCAATGGGACTGCCAGTGGCTCCATGGTGTGTTCCTTCCCACTGGTGATGAGTATGGAGTACGTGATTTACTTCAACTTCTTTGGGCTGATCTTCAGCCCCTTGGTGCTGATGACTGGCCTCTACATCCTGGTCTTCACCACCATCCGGAGGCAGCTGAGCCACAGCCAAGTGGCATGCAAGGCAAACAGGAAGTACTACCAGAAGGAGATGAAACTGGCCAGTTCTCTGGCGCTGGTGCTGCTGCTCTTTGCCATCTGCTGGATCCCGCTGCCCATCATTAACTCAGTGAGCTTCTTCTGCCCCCACTGTCAGGTCCCCAAGGCCGTCCTCTACCTCGGCATCCTCATGAGCCACGCCAACTCGGCAGTCAACCCCATCGTCTACACCTTCAAGATCCGCAAGTTCAGGCTGACCGTGCTGAAGATCTGGCGGCATTACTTTGTGAGGCGGAACAGCCTGGACAGCTCTCTGCCCCAGTCCTGCACCCTGCACTCGCTGGGGGCGGAGAAGTCGGACAGCGTCTGA

Function

GO: NA

KEGG:

id description
K04265 ADORA1; adenosine receptor A1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU59664 lncRNA downstream 21512 47540563 ~ 47545591 (-) True G47809
TU59662 lncRNA downstream 71419 47495411 ~ 47495684 (-) True G47807
TU59609 lncRNA downstream 339849 47225801 ~ 47227254 (-) True G47766
TU59536 lncRNA downstream 446502 47057539 ~ 47120601 (-) True G47718
TU59711 lncRNA upstream 118070 47689845 ~ 47694894 (-) True G47839
TU59780 lncRNA upstream 395650 47967425 ~ 47974915 (-) False G47896
TU59811 lncRNA upstream 444786 48016561 ~ 48016838 (-) True G47917
TU59896 lncRNA upstream 607492 48179267 ~ 48179685 (-) True G47991
TU59908 lncRNA upstream 644100 48215875 ~ 48216209 (-) True G47995
AMCG00013938 mRNA downstream 2392 47552134 ~ 47564711 (-) True AMCG00013938
AMCG00013935 mRNA downstream 135624 47421308 ~ 47431479 (-) True AMCG00013935
AMCG00013936 mRNA downstream 150721 47410368 ~ 47416382 (-) True AMCG00013936
AMCG00013934 mRNA downstream 199041 47323711 ~ 47368062 (-) True AMCG00013934
AMCG00013933 mRNA downstream 277062 47275671 ~ 47290041 (-) True AMCG00013933
AMCG00013940 mRNA upstream 11810 47583585 ~ 47623958 (-) True AMCG00013940
AMCG00013942 mRNA upstream 137438 47709213 ~ 47715995 (-) True AMCG00013942
AMCG00013944 mRNA upstream 277504 47849279 ~ 47857162 (-) True AMCG00013944
AMCG00013946 mRNA upstream 294217 47865992 ~ 47868234 (-) False AMCG00013946
AMCG00013945 mRNA upstream 297650 47869425 ~ 47907166 (-) True AMCG00013945
TU59572 other downstream 366206 47198343 ~ 47200897 (-) False AMCG00013932
TU59474 other downstream 691733 46871869 ~ 46875370 (-) True G47666
TU59251 other downstream 1403616 46160539 ~ 46163487 (-) True G47501
TU59204 other downstream 1483561 46075429 ~ 46083542 (-) True AMCG00013890
TU59142 other downstream 1592792 45963891 ~ 45974311 (-) True AMCG00013883
TU59752 other upstream 293075 47864850 ~ 47868863 (-) True AMCG00013946
TU59777 other upstream 395650 47967425 ~ 47974915 (-) True G47896
TU60179 other upstream 1246208 48817983 ~ 48821156 (-) False AMCG00013991
TU60180 other upstream 1246208 48817983 ~ 48821156 (-) False AMCG00013991
TU60181 other upstream 1246208 48817983 ~ 48821156 (-) True AMCG00013991

Expression Profile