RNA id: AMCG00013987


Basic Information

Item Value
RNA id AMCG00013987
length 198
RNA type mRNA
GC content 0.63
exon number 2
gene id AMCG00013987
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 48792374 ~ 48792875 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTGCTCTGGCAATTTCTGCAGCTAAGTGCCTGCGATGGAAGGAGGCCCCTGCTGCCGCCCACCTTCACCACCGCTGATCTcgtCGTTGCCTCCCCTGCCTGTGTCACTGGTCAGAGCCGAGGCCATGCCCTGGGCGTCGATCGGTTCTCGCAGCCGTTAATCAGTTTGCCTGCAGGAGCCGGGCCCTGGCACTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60148 lncRNA downstream 141145 48645190 ~ 48651229 (-) True G48175
TU60061 lncRNA downstream 246099 48545237 ~ 48546275 (-) True G48106
TU60047 lncRNA downstream 286238 48505871 ~ 48506136 (-) True G48092
TU60041 lncRNA downstream 308064 48479448 ~ 48484310 (-) True G48086
TU60040 lncRNA downstream 319442 48470333 ~ 48472932 (-) True AMCG00013967
TU60289 lncRNA upstream 234409 49027284 ~ 49050432 (-) True G48275
TU60404 lncRNA upstream 560817 49353692 ~ 49354535 (-) True G48363
TU60417 lncRNA upstream 660158 49453033 ~ 49453872 (-) True G48370
TU60464 lncRNA upstream 744853 49537728 ~ 49595073 (-) False G48398
TU60462 lncRNA upstream 748484 49541359 ~ 49545278 (-) True G48398
AMCG00013981 mRNA downstream 7149 48776500 ~ 48785225 (-) True AMCG00013981
AMCG00013980 mRNA downstream 16236 48757586 ~ 48776138 (-) True AMCG00013980
AMCG00013979 mRNA downstream 37547 48745893 ~ 48754827 (-) True AMCG00013979
AMCG00013976 mRNA downstream 128921 48651289 ~ 48663453 (-) True AMCG00013976
AMCG00013974 mRNA downstream 204053 48585631 ~ 48588321 (-) True AMCG00013974
AMCG00013986 mRNA upstream 2344 48795219 ~ 48807587 (-) True AMCG00013986
AMCG00013991 mRNA upstream 25748 48818623 ~ 48819833 (-) False AMCG00013991
AMCG00013990 mRNA upstream 58413 48851288 ~ 48852970 (-) True AMCG00013990
AMCG00013994 mRNA upstream 125522 48918397 ~ 48925913 (-) True AMCG00013994
AMCG00014000 mRNA upstream 500252 49293127 ~ 49298717 (-) True AMCG00014000
TU59777 other downstream 817459 47967425 ~ 47974915 (-) True G47896
TU59752 other downstream 923511 47864850 ~ 47868863 (-) True AMCG00013946
TU59572 other downstream 1591477 47198343 ~ 47200897 (-) False AMCG00013932
TU59474 other downstream 1917004 46871869 ~ 46875370 (-) True G47666
TU59251 other downstream 2628887 46160539 ~ 46163487 (-) True G47501
TU60179 other upstream 25108 48817983 ~ 48821156 (-) False AMCG00013991
TU60180 other upstream 25108 48817983 ~ 48821156 (-) False AMCG00013991
TU60181 other upstream 25108 48817983 ~ 48821156 (-) True AMCG00013991
TU60423 other upstream 691625 49484500 ~ 49484767 (-) True G48373
TU60452 other upstream 701852 49494727 ~ 49498630 (-) True G48392

Expression Profile