Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013996 |
| length | 1140 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 5 |
| gene id | AMCG00013996 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 49345097 ~ 49348601 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| GO:0008410 | CoA-transferase activity | molecular_function |
| GO:0008260 | 3-oxoacid CoA-transferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU60257 | lncRNA | upstream | 233014 | 49068105 ~ 49112083 (+) | True | G48243 |
| TU60247 | lncRNA | upstream | 249551 | 49090314 ~ 49095546 (+) | True | G48235 |
| TU60250 | lncRNA | upstream | 294799 | 49027168 ~ 49050298 (+) | True | G48236 |
| TU60146 | lncRNA | upstream | 490734 | 48853986 ~ 48854363 (+) | True | G48173 |
| TU60144 | lncRNA | upstream | 494086 | 48846064 ~ 48851011 (+) | True | G48171 |
| TU60383 | lncRNA | downstream | 104432 | 49453033 ~ 49453872 (+) | True | G48353 |
| TU60389 | lncRNA | downstream | 105383 | 49453984 ~ 49456698 (+) | True | G48354 |
| TU60422 | lncRNA | downstream | 135888 | 49484489 ~ 49484959 (+) | True | G48372 |
| TU60526 | lncRNA | downstream | 330896 | 49679497 ~ 49679876 (+) | True | G48449 |
| TU60545 | lncRNA | downstream | 381070 | 49729671 ~ 49731800 (+) | True | G48460 |
| AMCG00013993 | mRNA | upstream | 388232 | 48939062 ~ 48956865 (+) | True | AMCG00013993 |
| AMCG00013992 | mRNA | upstream | 432029 | 48908137 ~ 48913068 (+) | True | AMCG00013992 |
| AMCG00013995 | mRNA | upstream | 441067 | 48896802 ~ 48904030 (+) | True | AMCG00013995 |
| AMCG00013988 | mRNA | upstream | 456928 | 48886754 ~ 48888169 (+) | True | AMCG00013988 |
| AMCG00013982 | mRNA | upstream | 501471 | 48839531 ~ 48843626 (+) | True | AMCG00013982 |
| AMCG00014005 | mRNA | downstream | 65354 | 49413955 ~ 49419897 (+) | True | AMCG00014005 |
| AMCG00014004 | mRNA | downstream | 92783 | 49441384 ~ 49448751 (+) | True | AMCG00014004 |
| AMCG00014010 | mRNA | downstream | 191829 | 49540430 ~ 49544710 (+) | False | AMCG00014010 |
| AMCG00014009 | mRNA | downstream | 203558 | 49552159 ~ 49556841 (+) | True | AMCG00014009 |
| AMCG00014022 | mRNA | downstream | 216363 | 49564964 ~ 49569099 (+) | True | AMCG00014022 |
| TU60243 | other | upstream | 244639 | 49076742 ~ 49100458 (+) | True | G48231 |
| TU60248 | other | upstream | 278081 | 49014629 ~ 49067016 (+) | False | G48235 |
| TU60138 | other | upstream | 519042 | 48821250 ~ 48826055 (+) | False | AMCG00013985 |
| TU60116 | other | upstream | 566638 | 48776497 ~ 48778459 (+) | True | G48150 |
| TU60104 | other | upstream | 584385 | 48754953 ~ 48760712 (+) | False | G48142 |
| TU60435 | other | downstream | 189453 | 49538054 ~ 49545335 (+) | False | AMCG00014010 |
| TU60436 | other | downstream | 189453 | 49538054 ~ 49545335 (+) | False | AMCG00014010 |
| TU60437 | other | downstream | 189453 | 49538054 ~ 49545335 (+) | True | AMCG00014010 |
| TU60438 | other | downstream | 189453 | 49538054 ~ 49545335 (+) | False | AMCG00014010 |
| TU60500 | other | downstream | 265100 | 49613701 ~ 49617240 (+) | True | AMCG00014021 |
