RNA id: AMCG00014010



Basic Information


Item Value
RNA id AMCG00014010
length 810
RNA type mRNA
GC content 0.57
exon number 6
gene id AMCG00014010
representative False

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49538054 ~ 49545335 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGGGTCTACCTATCCTGGTCCAGTCCTGAGACCCCTGCTGCTTCCTGTTACGGGTTTAGGGGGGTGGGAGACCCCGCCATGCACAGAGACTGTCCGCTCGACTGCAAGGTCTACGTCGGGAACCTGGGCAACAATGGCAACAAGACTGAGCTGGAGCGCGCCTTCGGCTACTACGGGCCCCTGCGCAGCGTGTGGGTCGCCCGCAACCCACCCGGCTTCGCCTTTGTGGAGTTCGAGGACCCCCGCGATGCCGCTGACGCCGTCAGGGAGCTGGACGGGAGGAATCTGTGCGCATGCCGCGTGCGTGTAGAGCTGTCCAACGGGGAGAAGCGCACCCGCAACCGAGGGCCCCCGCCATCCTGGAGCCGCCGCCCCCGGGACGACTACAGACGCCGCAGCCCGCCGCCCCGGCGCAGATCGCCACGCAGGAGGAGCTTCAGTCGCAGCCGCAGCAGATCTCTGTCCAGAGACCGAAGAAGGGAGAGGTCCCTCTCCCGTGACAGGACCCGTAAGCCTTCGCGTTCCTTCTCCAGATCTCGCAGccGTTCCAGGTCAAATGAACGGAAGTGAAGTGATGCTACAGTGGAGGAGAGATGTGGAGAAAGTTCAACCCCTGAAAGCCCACCCTTCCCCTGGTAGCATCCCCTTAAGGACTATGAGCTCTGTAGAGATGTGCtattcttttccatttttttttttttttttttatatataaattctaCGTTTTAGCGGTTATGCCTTTATTTCCctccccccccttttttttttttttttttaaatctgtgtgaAATGCAAGATTAACAGTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU60422 lncRNA upstream 55471 49484489 ~ 49484959 (+) True G48372
TU60389 lncRNA upstream 83732 49453984 ~ 49456698 (+) True G48354
TU60383 lncRNA upstream 86558 49453033 ~ 49453872 (+) True G48353
TU60257 lncRNA upstream 428347 49068105 ~ 49112083 (+) True G48243
TU60247 lncRNA upstream 444884 49090314 ~ 49095546 (+) True G48235
TU60526 lncRNA downstream 134787 49679497 ~ 49679876 (+) True G48449
TU60545 lncRNA downstream 184961 49729671 ~ 49731800 (+) True G48460
TU60518 lncRNA downstream 201805 49746515 ~ 49747587 (+) False AMCG00014028
TU60553 lncRNA downstream 208874 49753584 ~ 49754027 (+) True G48467
TU60571 lncRNA downstream 248496 49793206 ~ 49793650 (+) True G48479
AMCG00014004 mRNA upstream 91679 49441384 ~ 49448751 (+) True AMCG00014004
AMCG00014005 mRNA upstream 120533 49413955 ~ 49419897 (+) True AMCG00014005
AMCG00013996 mRNA upstream 191829 49345097 ~ 49348601 (+) True AMCG00013996
AMCG00013993 mRNA upstream 583565 48939062 ~ 48956865 (+) True AMCG00013993
AMCG00013992 mRNA upstream 627362 48908137 ~ 48913068 (+) True AMCG00013992
AMCG00014009 mRNA downstream 7449 49552159 ~ 49556841 (+) True AMCG00014009
AMCG00014022 mRNA downstream 20254 49564964 ~ 49569099 (+) True AMCG00014022
AMCG00014015 mRNA downstream 25491 49570201 ~ 49586822 (+) True AMCG00014015
AMCG00014013 mRNA downstream 43467 49588177 ~ 49594866 (+) True AMCG00014013
AMCG00014016 mRNA downstream 65647 49610357 ~ 49613183 (+) True AMCG00014016
TU60357 other upstream 193209 49345228 ~ 49347221 (+) False AMCG00013996
TU60243 other upstream 439972 49076742 ~ 49100458 (+) True G48231
TU60248 other upstream 473414 49014629 ~ 49067016 (+) False G48235
TU60138 other upstream 714375 48821250 ~ 48826055 (+) False AMCG00013985
TU60116 other upstream 761971 48776497 ~ 48778459 (+) True G48150
TU60500 other downstream 68991 49613701 ~ 49617240 (+) True AMCG00014021
TU60533 other downstream 144962 49689672 ~ 49692361 (+) True G48451
TU60535 other downstream 153910 49698620 ~ 49699622 (+) True G48453
TU60536 other downstream 156541 49701251 ~ 49701943 (+) True G48454
TU60537 other downstream 158368 49703078 ~ 49703528 (+) True G48455

Expression Profile