RNA id: AMCG00014030



Basic Information


Item Value
RNA id AMCG00014030
length 744
RNA type mRNA
GC content 0.61
exon number 5
gene id AMCG00014030
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49736414 ~ 49738159 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGCCGCATGGAGAGCGGCTCACTTCGGAGGGTCCGAGTGCGGCTCACTTCGGAGGaggAGTCGGTGGTCCAGGAGACGGAGGAGGTGTTCTGCAGTTATGTGTATTTCCGCTACACTCAGGAGGACGAAGAGGAGAAGCTGCCCAGAGACCCCGAGATCATGGCCCTGCAGCCCAACACATCCAGGTCAGCCCTGTGGATTcaggcacacgcacacgcacacacacacacacacacacacacacacacacacacacacacacacacacatccagttCAGCCCTGCGGACTCACAGCTAGGGAGGGAGGAGGACGAGAATGCGTCTCCCCCCCCAGCCCCTTGTCCCGGGTGGGGCAGCAGCTGGCTCTTATCGCTTCTCCATCAACCCCCGCCGTGCTCCCGGCTCTGCTCCCCTCCCCGACTCTGAGCCGCGTCATGAGAGTCCTTCTGCACAGCCTCCCAGTCCTGCCCCCCCGCAGTGCTTGTGCCGCAGTGAGAGCGCATGCTGTGCTATTCTGTGCCCCCCCAAGCTCAatgactctctccctctctctctctctcagcttgtTTGACTCGGAGATTAACTGGGGCCGCGTGATCGCGCTGCTGAGCTTCGGGTACCGCATGGCACTGCACctggCCGCTCTGGAGCTGGACAATGTCTATGTGAAGTACATGCTGGGGCTGCTGGCCGTGCTGCTGCTGGGCCAGCTGATCATGCGCCGATTCTTCAGCTCTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU60545 lncRNA upstream 4614 49729671 ~ 49731800 (+) True G48460
TU60526 lncRNA upstream 56538 49679497 ~ 49679876 (+) True G48449
TU60422 lncRNA upstream 251455 49484489 ~ 49484959 (+) True G48372
TU60389 lncRNA upstream 279716 49453984 ~ 49456698 (+) True G48354
TU60383 lncRNA upstream 282542 49453033 ~ 49453872 (+) True G48353
TU60518 lncRNA downstream 8356 49746515 ~ 49747587 (+) False AMCG00014028
TU60553 lncRNA downstream 15425 49753584 ~ 49754027 (+) True G48467
TU60571 lncRNA downstream 55047 49793206 ~ 49793650 (+) True G48479
TU60552 lncRNA downstream 69989 49808148 ~ 49810966 (+) False AMCG00014038
TU60664 lncRNA downstream 119321 49857480 ~ 49857687 (+) True G48552
AMCG00014029 mRNA upstream 7422 49717514 ~ 49728992 (+) True AMCG00014029
AMCG00014032 mRNA upstream 19533 49706861 ~ 49716881 (+) False AMCG00014032
AMCG00014026 mRNA upstream 30156 49703711 ~ 49706258 (+) True AMCG00014026
AMCG00014027 mRNA upstream 39394 49695266 ~ 49697020 (+) True AMCG00014027
AMCG00014019 mRNA upstream 47757 49686808 ~ 49688657 (+) True AMCG00014019
AMCG00014028 mRNA downstream 1153 49739312 ~ 49749169 (+) True AMCG00014028
AMCG00014037 mRNA downstream 32434 49770593 ~ 49771894 (+) True AMCG00014037
AMCG00014031 mRNA downstream 34002 49772161 ~ 49772784 (+) True AMCG00014031
AMCG00014038 mRNA downstream 70412 49808571 ~ 49813985 (+) True AMCG00014038
AMCG00014040 mRNA downstream 99266 49837425 ~ 49842315 (+) True AMCG00014040
TU60541 other upstream 12538 49723026 ~ 49723876 (+) True G48457
TU60542 other upstream 18986 49706843 ~ 49717428 (+) True AMCG00014032
TU60537 other upstream 32886 49703078 ~ 49703528 (+) True G48455
TU60536 other upstream 34471 49701251 ~ 49701943 (+) True G48454
TU60535 other upstream 36792 49698620 ~ 49699622 (+) True G48453
TU60549 other downstream 3693 49741852 ~ 49742514 (+) True G48464
TU60679 other downstream 175770 49913929 ~ 49914542 (+) True G48566
TU60704 other downstream 198656 49936815 ~ 49948082 (+) True G48578
TU60712 other downstream 218033 49956192 ~ 49956729 (+) True G48583

Expression Profile