RNA id: AMCG00014033


Basic Information

Item Value
RNA id AMCG00014033
length 950
RNA type mRNA
GC content 0.61
exon number 3
gene id AMCG00014033
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49721746 ~ 49724237 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCGCTCTCCAGCCACTGTGCGCGGGTCACATGACCCCGGAGTCCCTCTTAAAGGCGCAGCGAGCGCAGAGCTACATCCCCGTATGAAAGCCTGAGAGCCGCGCCGCGCCGATTCCCTCCAGCGTCCACGCACGACGCCCGCACTGCTTTAAAGCTGCAGTCGCAGTAGTTGTATTACCTATGAATCGCTGACTCTCATCCACTGGTGGGTGACAAGATTGTCATCTCCAGAAACGGCgccatgtatttattattactaatgaTACCACTGACGCTGAGGATATTCGACGCTCTTGTACATCATACACTCCGCTCATGAGCGGCGCAGGGACTCGTATATGCCTGTAGTGCAGTTTGTTTCCGGACCCTTTTCAGCGGCGCACCGGGCGGAAGCAGCTCGTTGTTGTGGCGCACACGTCCGGTGCTCTTGAGTGCGCGAGGCCGGGTGTCAGTGCAGCGAGCCGCGGAGCAGCGAGGATGAAGGCCGCGCCGAGAGCAGTGGAGCCCAGGCCCTCCGGGGTGAAGGAGTGGGTCAGCACCGCCTTCCGCTTCGCCACCGACAGGAACGACTTCAGAAGGAATCTGCTGGTTAATGTGGGTCTGTTCGCAGCCGGGGTCTGGGTCGCCAGGAATCTGTCCGACTTCGATCTGATGTCCCCGCAGCCCCTCTCTTAACCGCGGGGAGGAGGTGAGGCAGCTGTCTGAGCCGGGGAGGTAAGAGCGACACGCCGCCGCGGTGCAGCGAGGCCTGGCGATCCGGATCTCGTCAGCCATTTCACAGAGCGGCACCAGGGGCTGCGCTGTGTGTGCACCCAGCTGCCCAGAGTACGTGtggggtggtgtgtgtgtccagAGTACATGTGGggtggtgtatgtgtgtgtgtgtccagagtACATGtggggtggtgtgtgtCTGTCCAGAGTACGTGtggggtggtgtgtgtgtccagA

Function

GO: NA

KEGG:

id description
K17772 TOM6; mitochondrial import receptor subunit TOM6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU60588 lncRNA downstream 47325 49663092 ~ 49675750 (-) True G48494
TU60514 lncRNA downstream 95308 49623810 ~ 49627767 (-) True G48439
TU60512 lncRNA downstream 99884 49622097 ~ 49623191 (-) True G48437
TU60506 lncRNA downstream 104120 49618277 ~ 49618955 (-) True G48433
TU60502 lncRNA downstream 109101 49613696 ~ 49613974 (-) True G48430
TU60603 lncRNA upstream 1498 49725735 ~ 49726249 (-) True G48508
TU60604 lncRNA upstream 2051 49726288 ~ 49727007 (-) True G48509
TU60607 lncRNA upstream 9672 49733909 ~ 49734172 (-) True G48512
TU60612 lncRNA upstream 20709 49744946 ~ 49747551 (-) False G48516
TU60616 lncRNA upstream 24352 49748589 ~ 49749282 (-) True G48517
AMCG00014035 mRNA downstream 19702 49697861 ~ 49703373 (-) True AMCG00014035
AMCG00014034 mRNA downstream 28911 49689679 ~ 49694164 (-) True AMCG00014034
AMCG00014024 mRNA downstream 42713 49678320 ~ 49680362 (-) True AMCG00014024
AMCG00014023 mRNA downstream 115881 49595783 ~ 49607194 (-) True AMCG00014023
AMCG00014012 mRNA downstream 164315 49557804 ~ 49558760 (-) True AMCG00014012
AMCG00014036 mRNA upstream 26231 49750468 ~ 49757241 (-) True AMCG00014036
AMCG00014046 mRNA upstream 59035 49783272 ~ 49788746 (-) True AMCG00014046
AMCG00014048 mRNA upstream 67106 49791343 ~ 49794766 (-) True AMCG00014048
AMCG00014047 mRNA upstream 72609 49796846 ~ 49804601 (-) True AMCG00014047
AMCG00014045 mRNA upstream 89812 49814049 ~ 49818276 (-) True AMCG00014045
TU60601 other downstream 1549 49719765 ~ 49721526 (-) True G48506
TU60452 other downstream 224445 49494727 ~ 49498630 (-) True G48392
TU60423 other downstream 238308 49484500 ~ 49484767 (-) True G48373
TU60179 other downstream 901919 48817983 ~ 48821156 (-) False AMCG00013991
TU60605 other upstream 4267 49728504 ~ 49729055 (-) True G48510
TU60614 other upstream 20709 49744946 ~ 49747551 (-) True G48516
TU60684 other upstream 140087 49864324 ~ 49930152 (-) False AMCG00014043
TU60685 other upstream 146756 49870993 ~ 49873375 (-) False G48570
TU60686 other upstream 146756 49870993 ~ 49918397 (-) True G48570

Expression Profile