RNA id: AMCG00014037



Basic Information


Item Value
RNA id AMCG00014037
length 972
RNA type mRNA
GC content 0.47
exon number 7
gene id AMCG00014037
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49770593 ~ 49771894 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACATCAAAACTTCCAGCAAAAAAGCCCAAAATCTACTTTGGTCATTACCAACCTGAATGGGAGACTGACAAGGAGTTCCAGAAGATGATCACTAGTTCAGAAGAAGGAAGAGAATTCGCTTATTGTAGGAATTTGCTTACATGTAGGAAGTCTGTGAAAGTTTCAGCATCTGGCCGATTCGAGACATTTTCAAACGGAAACACACAAGCGTGCAGTGCAAAAATCAAAGCAGCATATACCCATCGGTCAGCAATTTCGACAGCAAAACAAGAAGACGAATTTCGACCAATGTGTGACAGAGGCCGAGATCATAATTTGCCATCGACCACCGCTGACCATTTCAATGATTTAGCCACCCAGATTGTCAAAAGGTGCCTCTCGACGGAGCAAACAACTCCTATTCTTGAAAGCTGCAGAAATGGACCGTTTTCGTTACTCATCGATGAAACTAACAACAAGAACTATGATAAACGCCTTGTGGTGCTGGTTCGGCTCTTCAACCTGGAGTCAGGAACAAACACCAGGATCCTTGACCTTCCAGTGCTTTCTGGAGGGACAGCAGAGGATGTGTTTGCTGCAGTTGCCACAGTGATTGATGGGCAGAATATTCCCTGGAAGAACATGGTCGGATTTACTAGTGACAACTGCAACATGATGATGGGCCAGCACAACTCCGTCCTGTCTCAAACGAACCCGGATATTTTCACCCTTGGCTGCATATGTCATCTGGCCAACCTCTGCGCTAAAGCTGCCATCAAGGTGATGTCTGTTCCAGTGGATGACATCTTGATTGACATCTACTACTTTCACTTTGTGATTCCAGTTCCAAAAGGAGAGGTGGAGGAGAGGACGATCCTCAAGCACTGCCCTACCAGATGGCTGAGTTTGGAGAGGGTGGTCAATAGGATGCTGCAGCAGTACCCTGCCCTGCTCAGAGCCACCCTGAGTGTGAAAAGCCAGGCAAGTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU60553 lncRNA upstream 16566 49753584 ~ 49754027 (+) True G48467
TU60518 lncRNA upstream 23006 49746515 ~ 49747587 (+) False AMCG00014028
TU60545 lncRNA upstream 38793 49729671 ~ 49731800 (+) True G48460
TU60526 lncRNA upstream 90717 49679497 ~ 49679876 (+) True G48449
TU60422 lncRNA upstream 285634 49484489 ~ 49484959 (+) True G48372
TU60571 lncRNA downstream 21312 49793206 ~ 49793650 (+) True G48479
TU60552 lncRNA downstream 36254 49808148 ~ 49810966 (+) False AMCG00014038
TU60664 lncRNA downstream 85586 49857480 ~ 49857687 (+) True G48552
TU60672 lncRNA downstream 99212 49871106 ~ 49873377 (+) True G48560
AMCG00014028 mRNA upstream 21424 49739312 ~ 49749169 (+) True AMCG00014028
AMCG00014030 mRNA upstream 32434 49736414 ~ 49738159 (+) True AMCG00014030
AMCG00014029 mRNA upstream 41601 49717514 ~ 49728992 (+) True AMCG00014029
AMCG00014032 mRNA upstream 53712 49706861 ~ 49716881 (+) False AMCG00014032
AMCG00014026 mRNA upstream 64335 49703711 ~ 49706258 (+) True AMCG00014026
AMCG00014031 mRNA downstream 267 49772161 ~ 49772784 (+) True AMCG00014031
AMCG00014038 mRNA downstream 36677 49808571 ~ 49813985 (+) True AMCG00014038
AMCG00014040 mRNA downstream 65531 49837425 ~ 49842315 (+) True AMCG00014040
AMCG00014050 mRNA downstream 138664 49910558 ~ 49916242 (+) True AMCG00014050
AMCG00014039 mRNA downstream 146733 49918627 ~ 49925703 (+) True AMCG00014039
TU60549 other upstream 28079 49741852 ~ 49742514 (+) True G48464
TU60541 other upstream 46717 49723026 ~ 49723876 (+) True G48457
TU60542 other upstream 53165 49706843 ~ 49717428 (+) True AMCG00014032
TU60537 other upstream 67065 49703078 ~ 49703528 (+) True G48455
TU60536 other upstream 68650 49701251 ~ 49701943 (+) True G48454
TU60679 other downstream 142035 49913929 ~ 49914542 (+) True G48566
TU60704 other downstream 164921 49936815 ~ 49948082 (+) True G48578
TU60712 other downstream 184298 49956192 ~ 49956729 (+) True G48583

Expression Profile