Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU47995 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.60 |
| exon number | 1 |
| gene id | G38501 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 2294960 ~ 2295164 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04530 | Tight junction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47972 | lncRNA | downstream | 262749 | 2031837 ~ 2032211 (-) | True | G38478 |
| TU47969 | lncRNA | downstream | 299897 | 1994847 ~ 1995063 (-) | True | G38475 |
| TU47966 | lncRNA | downstream | 393036 | 1900760 ~ 1901924 (-) | True | G38473 |
| TU47965 | lncRNA | downstream | 407369 | 1884629 ~ 1887591 (-) | True | G38472 |
| TU47918 | lncRNA | downstream | 711527 | 1578955 ~ 1583433 (-) | False | AMCG00012646 |
| TU48044 | lncRNA | upstream | 203759 | 2498923 ~ 2500343 (-) | True | G38533 |
| TU48051 | lncRNA | upstream | 269141 | 2564305 ~ 2564702 (-) | True | G38539 |
| TU48062 | lncRNA | upstream | 310334 | 2605498 ~ 2605768 (-) | True | G38549 |
| TU48065 | lncRNA | upstream | 327825 | 2622989 ~ 2623189 (-) | True | G38552 |
| TU48086 | lncRNA | upstream | 430865 | 2726029 ~ 2775202 (-) | True | G38573 |
| AMCG00012646 | mRNA | downstream | 477760 | 1583313 ~ 1817200 (-) | True | AMCG00012646 |
| AMCG00012642 | mRNA | downstream | 712690 | 1360323 ~ 1582270 (-) | True | AMCG00012642 |
| AMCG00012643 | mRNA | downstream | 949042 | 1038769 ~ 1345918 (-) | True | AMCG00012643 |
| AMCG00012640 | mRNA | downstream | 1257607 | 1013482 ~ 1037353 (-) | True | AMCG00012640 |
| AMCG00012635 | mRNA | downstream | 1374835 | 914435 ~ 920125 (-) | True | AMCG00012635 |
| AMCG00012649 | mRNA | upstream | 20838 | 2316002 ~ 2317119 (-) | True | AMCG00012649 |
| AMCG00012648 | mRNA | upstream | 24363 | 2319527 ~ 2345217 (-) | True | AMCG00012648 |
| AMCG00012655 | mRNA | upstream | 126444 | 2421608 ~ 2431840 (-) | True | AMCG00012655 |
| AMCG00012656 | mRNA | upstream | 141686 | 2436850 ~ 2468497 (-) | True | AMCG00012656 |
| AMCG00012663 | mRNA | upstream | 582604 | 2877768 ~ 2910246 (-) | True | AMCG00012663 |
| TU47984 | other | downstream | 110797 | 2183885 ~ 2184163 (-) | True | G38490 |
| TU47949 | other | downstream | 517739 | 1776854 ~ 1777221 (-) | True | G38458 |
| TU47757 | other | downstream | 1755369 | 523747 ~ 539591 (-) | True | AMCG00012628 |
| TU49217 | other | upstream | 4160557 | 6455721 ~ 6456178 (-) | True | G39487 |
| TU49940 | other | upstream | 6817277 | 9112441 ~ 9113076 (-) | False | AMCG00012829 |
| TU50581 | other | upstream | 9945232 | 12240396 ~ 12253443 (-) | True | AMCG00012888 |
| TU50830 | other | upstream | 10819729 | 13114893 ~ 13115487 (-) | True | G40778 |
| TU52042 | other | upstream | 15585061 | 17880225 ~ 17899426 (-) | False | AMCG00013038 |
