Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU50116 |
| length | 210 |
| lncRNA type | intronic |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G40203 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 10172254 ~ 10172463 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04120 | Ubiquitin mediated proteolysis |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50050 | lncRNA | upstream | 698034 | 9473973 ~ 9474220 (+) | True | G40146 |
| TU50049 | lncRNA | upstream | 698386 | 9473545 ~ 9473868 (+) | True | G40145 |
| TU50017 | lncRNA | upstream | 877612 | 9294331 ~ 9294642 (+) | True | G40121 |
| TU50015 | lncRNA | upstream | 907161 | 9264878 ~ 9265093 (+) | True | G40119 |
| TU49926 | lncRNA | upstream | 1078408 | 9091314 ~ 9093846 (+) | True | G40041 |
| TU50128 | lncRNA | downstream | 202568 | 10375031 ~ 10424371 (+) | True | G40214 |
| TU50179 | lncRNA | downstream | 368265 | 10540728 ~ 10541960 (+) | True | AMCG00012848 |
| TU50237 | lncRNA | downstream | 567969 | 10740432 ~ 10743104 (+) | True | G40303 |
| TU50386 | lncRNA | downstream | 931362 | 11103825 ~ 11159087 (+) | False | G40436 |
| TU50385 | lncRNA | downstream | 984571 | 11157034 ~ 11159087 (+) | True | G40436 |
| AMCG00012836 | mRNA | upstream | 401583 | 9751636 ~ 9770671 (+) | True | AMCG00012836 |
| AMCG00012835 | mRNA | upstream | 448324 | 9702270 ~ 9723930 (+) | True | AMCG00012835 |
| AMCG00012834 | mRNA | upstream | 480915 | 9634234 ~ 9691339 (+) | True | AMCG00012834 |
| AMCG00012833 | mRNA | upstream | 703006 | 9412326 ~ 9469248 (+) | True | AMCG00012833 |
| AMCG00012832 | mRNA | upstream | 789753 | 9375167 ~ 9382501 (+) | True | AMCG00012832 |
| AMCG00012839 | mRNA | downstream | 236864 | 10409327 ~ 10410281 (+) | True | AMCG00012839 |
| AMCG00012843 | mRNA | downstream | 299402 | 10471865 ~ 10492477 (+) | True | AMCG00012843 |
| AMCG00012844 | mRNA | downstream | 359516 | 10531979 ~ 10534605 (+) | True | AMCG00012844 |
| AMCG00012848 | mRNA | downstream | 368819 | 10541282 ~ 10541470 (+) | False | AMCG00012848 |
| AMCG00012850 | mRNA | downstream | 374088 | 10546551 ~ 10550066 (+) | True | AMCG00012850 |
| TU49939 | other | upstream | 1059153 | 9112460 ~ 9113101 (+) | False | AMCG00012820 |
| TU49527 | other | upstream | 2336040 | 7835346 ~ 7836214 (+) | True | G39709 |
| TU49477 | other | upstream | 2444426 | 7725488 ~ 7727828 (+) | True | G39670 |
| TU49223 | other | upstream | 3654333 | 6517408 ~ 6517921 (+) | False | AMCG00012748 |
| TU49057 | other | upstream | 4348934 | 5807846 ~ 5823320 (+) | False | AMCG00012718 |
| TU50138 | other | downstream | 264444 | 10436907 ~ 10444447 (+) | True | G40224 |
| TU50139 | other | downstream | 264444 | 10436907 ~ 10444447 (+) | False | G40224 |
| TU50140 | other | downstream | 264444 | 10436907 ~ 10444447 (+) | False | G40224 |
| TU50630 | other | downstream | 2316112 | 12488575 ~ 12535929 (+) | True | G40629 |
| TU50637 | other | downstream | 2317336 | 12489799 ~ 12490422 (+) | False | AMCG00012894 |
