RNA id: TU51721


Basic Information

Item Value
RNA id TU51721
length 215
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G41510
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16217381 ~ 16217595 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggaactgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaatcagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagagtcgtcacaatct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU51713 lncRNA downstream 9204 16169309 ~ 16208177 (-) True G41506
TU51660 lncRNA downstream 181445 16035647 ~ 16035936 (-) True G41460
TU51651 lncRNA downstream 201360 16014136 ~ 16016021 (-) True G41455
TU51650 lncRNA downstream 206017 16011012 ~ 16011364 (-) True G41454
TU51649 lncRNA downstream 207139 16009836 ~ 16010242 (-) True G41453
TU51729 lncRNA upstream 115636 16333231 ~ 16333595 (-) True G41518
TU51752 lncRNA upstream 405824 16623419 ~ 16623773 (-) True G41538
TU51754 lncRNA upstream 417367 16634962 ~ 16636441 (-) False AMCG00013018
TU51835 lncRNA upstream 929120 17146715 ~ 17146981 (-) True G41612
TU51850 lncRNA upstream 1084548 17302143 ~ 17302892 (-) True G41627
AMCG00013003 mRNA downstream 62526 16146243 ~ 16154855 (-) True AMCG00013003
AMCG00013001 mRNA downstream 89148 16108615 ~ 16128233 (-) True AMCG00013001
AMCG00013004 mRNA downstream 112962 16100316 ~ 16104419 (-) True AMCG00013004
AMCG00013002 mRNA downstream 132140 16081261 ~ 16085241 (-) True AMCG00013002
AMCG00012998 mRNA downstream 143353 16037883 ~ 16074028 (-) True AMCG00012998
AMCG00013007 mRNA upstream 32542 16250137 ~ 16251210 (-) True AMCG00013007
AMCG00013008 mRNA upstream 315155 16532750 ~ 16533847 (-) True AMCG00013008
AMCG00013018 mRNA upstream 412636 16630231 ~ 16639087 (-) True AMCG00013018
AMCG00013012 mRNA upstream 460565 16678160 ~ 16687304 (-) True AMCG00013012
AMCG00013011 mRNA upstream 498921 16716516 ~ 16718657 (-) True AMCG00013011
TU50830 other downstream 3101894 13114893 ~ 13115487 (-) True G40778
TU50581 other downstream 3963938 12240396 ~ 12253443 (-) True AMCG00012888
TU49940 other downstream 7104305 9112441 ~ 9113076 (-) False AMCG00012829
TU49217 other downstream 9761203 6455721 ~ 6456178 (-) True G39487
TU47984 other downstream 14033218 2183885 ~ 2184163 (-) True G38490
TU52042 other upstream 1662630 17880225 ~ 17899426 (-) False AMCG00013038
TU52041 other upstream 1736468 17954063 ~ 18043587 (-) False AMCG00013042
TU52091 other upstream 1958466 18176061 ~ 18191522 (-) True G41807
TU52133 other upstream 2025155 18242750 ~ 18244093 (-) True G41836
TU52315 other upstream 2759465 18977060 ~ 18998766 (-) True AMCG00013071

Expression Profile