RNA id: TU52391



Basic Information


Item Value
RNA id TU52391
length 223
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G42056
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 19684436 ~ 19684658 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aatttcaattaaagaagtgaatttatagtatcaccttatcacgaatcctggaatcttgtagaactcaatttctgtaataattggacgcagacaccaattccaaagatataaattgtcaaatttattcaaaaacaagactaaatgtagcactacactaattatacaaaagggaaaaactaattaaaattcaactctagatcaacaaatcaaagacaaatcactt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU52245 lncRNA downstream 986829 18696820 ~ 18697607 (-) True G41925
TU52242 lncRNA downstream 1023914 18660254 ~ 18660522 (-) True G41922
TU52190 lncRNA downstream 1250719 18429054 ~ 18433717 (-) True G41875
TU52161 lncRNA downstream 1298230 18331810 ~ 18386206 (-) False G41858
TU52393 lncRNA upstream 91866 19776524 ~ 19776729 (-) True G42058
TU52419 lncRNA upstream 301585 19986243 ~ 19987735 (-) True G42078
TU52493 lncRNA upstream 717050 20401708 ~ 20405085 (-) True G42136
TU52621 lncRNA upstream 981687 20666345 ~ 20674228 (-) True G42242
TU52672 lncRNA upstream 1205025 20889683 ~ 20890288 (-) True G42278
AMCG00013078 mRNA downstream 294315 19211843 ~ 19390121 (-) True AMCG00013078
AMCG00013075 mRNA downstream 475432 19080736 ~ 19209004 (-) True AMCG00013075
AMCG00013070 mRNA downstream 613064 19069196 ~ 19071372 (-) False AMCG00013070
AMCG00013069 mRNA downstream 638390 19025572 ~ 19046046 (-) True AMCG00013069
AMCG00013071 mRNA downstream 679176 18978443 ~ 19005260 (-) False AMCG00013071
AMCG00013077 mRNA upstream 278872 19963530 ~ 19978155 (-) True AMCG00013077
AMCG00013080 mRNA upstream 304203 19988861 ~ 20005821 (-) True AMCG00013080
AMCG00013083 mRNA upstream 684488 20369146 ~ 20372204 (-) True AMCG00013083
AMCG00013085 mRNA upstream 708996 20393654 ~ 20397861 (-) True AMCG00013085
AMCG00013084 mRNA upstream 721899 20406557 ~ 20445394 (-) True AMCG00013084
TU52331 other downstream 613018 19068245 ~ 19071418 (-) True AMCG00013070
TU52316 other downstream 661658 18977060 ~ 19022778 (-) False AMCG00013071
TU52315 other downstream 685670 18977060 ~ 18998766 (-) True AMCG00013071
TU52133 other downstream 1440343 18242750 ~ 18244093 (-) True G41836
TU52091 other downstream 1492914 18176061 ~ 18191522 (-) True G41807
TU52412 other upstream 295678 19980336 ~ 19982880 (-) True G42076
TU52536 other upstream 846536 20531194 ~ 20545811 (-) True AMCG00013090
TU52810 other upstream 1567449 21252107 ~ 21301421 (-) True G42366
TU52828 other upstream 1621528 21306186 ~ 21307693 (-) False AMCG00013112
TU52819 other upstream 1651559 21336217 ~ 21517177 (-) True G42371

Expression Profile