Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU55573 |
| length | 667 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G44581 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 32030256 ~ 32030922 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0031290 | retinal ganglion cell axon guidance | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55549 | lncRNA | upstream | 131054 | 31898621 ~ 31899202 (+) | True | G44561 |
| TU55535 | lncRNA | upstream | 158783 | 31784593 ~ 31871473 (+) | True | G44549 |
| TU55503 | lncRNA | upstream | 365095 | 31647363 ~ 31665161 (+) | False | G44529 |
| TU55502 | lncRNA | upstream | 365095 | 31658326 ~ 31665161 (+) | True | G44529 |
| TU55456 | lncRNA | upstream | 659254 | 31369207 ~ 31371002 (+) | True | G44486 |
| TU55582 | lncRNA | downstream | 22811 | 32053733 ~ 32057626 (+) | True | G44590 |
| TU55590 | lncRNA | downstream | 105308 | 32136230 ~ 32138577 (+) | True | G44598 |
| TU55609 | lncRNA | downstream | 160257 | 32191179 ~ 32191395 (+) | True | G44613 |
| TU55621 | lncRNA | downstream | 252692 | 32283614 ~ 32284951 (+) | False | AMCG00013473 |
| TU55623 | lncRNA | downstream | 255092 | 32286014 ~ 32286159 (+) | True | G44620 |
| AMCG00013472 | mRNA | upstream | 40080 | 31988690 ~ 31990176 (+) | True | AMCG00013472 |
| AMCG00013469 | mRNA | upstream | 108881 | 31915101 ~ 31921375 (+) | True | AMCG00013469 |
| AMCG00013468 | mRNA | upstream | 119085 | 31901530 ~ 31911171 (+) | False | AMCG00013468 |
| AMCG00013465 | mRNA | upstream | 257063 | 31772421 ~ 31773193 (+) | True | AMCG00013465 |
| AMCG00013462 | mRNA | upstream | 276848 | 31742807 ~ 31753408 (+) | True | AMCG00013462 |
| AMCG00013474 | mRNA | downstream | 195249 | 32226171 ~ 32226557 (+) | True | AMCG00013474 |
| AMCG00013473 | mRNA | downstream | 242507 | 32273429 ~ 32283927 (+) | True | AMCG00013473 |
| AMCG00013479 | mRNA | downstream | 315216 | 32346138 ~ 32389962 (+) | True | AMCG00013479 |
| AMCG00013477 | mRNA | downstream | 362896 | 32393818 ~ 32400452 (+) | True | AMCG00013477 |
| AMCG00013478 | mRNA | downstream | 392840 | 32423762 ~ 32455686 (+) | False | AMCG00013478 |
| TU55551 | other | upstream | 118455 | 31904968 ~ 31911801 (+) | True | AMCG00013468 |
| TU55261 | other | upstream | 1253087 | 30776851 ~ 30777169 (+) | True | G44325 |
| TU55111 | other | upstream | 1462037 | 30563368 ~ 30568219 (+) | True | AMCG00013417 |
| TU55098 | other | upstream | 1534600 | 30490827 ~ 30495656 (+) | True | AMCG00013416 |
| TU55045 | other | upstream | 1808047 | 30218910 ~ 30222209 (+) | False | AMCG00013396 |
| TU55622 | other | downstream | 242346 | 32273268 ~ 32283499 (+) | False | AMCG00013473 |
| TU55641 | other | downstream | 392354 | 32423276 ~ 32429887 (+) | False | AMCG00013478 |
| TU55642 | other | downstream | 392354 | 32423276 ~ 32429887 (+) | True | AMCG00013478 |
| TU55933 | other | downstream | 1075370 | 33106292 ~ 33106595 (+) | True | G44870 |
| TU55990 | other | downstream | 1345598 | 33376520 ~ 33394148 (+) | False | AMCG00013515 |
