Item | Value |
---|---|
RNA id | TU55590 |
length | 969 |
lncRNA type | inter_gene |
GC content | 0.41 |
exon number | 2 |
gene id | G44598 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030125.1 |
NCBI id | CM030125.1 |
chromosome length | 49972098 |
location | 32136230 ~ 32138577 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0005911 | cell-cell junction | cellular_component |
GO:0005921 | gap junction | cellular_component |
GO:0005922 | connexin complex | cellular_component |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU55582 | lncRNA | upstream | 78604 | 32053733 ~ 32057626 (+) | True | G44590 |
TU55573 | lncRNA | upstream | 105308 | 32030256 ~ 32030922 (+) | True | G44581 |
TU55549 | lncRNA | upstream | 237028 | 31898621 ~ 31899202 (+) | True | G44561 |
TU55535 | lncRNA | upstream | 264757 | 31784593 ~ 31871473 (+) | True | G44549 |
TU55503 | lncRNA | upstream | 471069 | 31647363 ~ 31665161 (+) | False | G44529 |
TU55609 | lncRNA | downstream | 52602 | 32191179 ~ 32191395 (+) | True | G44613 |
TU55621 | lncRNA | downstream | 145037 | 32283614 ~ 32284951 (+) | False | AMCG00013473 |
TU55623 | lncRNA | downstream | 147437 | 32286014 ~ 32286159 (+) | True | G44620 |
TU55639 | lncRNA | downstream | 258277 | 32396854 ~ 32398159 (+) | False | AMCG00013477 |
TU55727 | lncRNA | downstream | 404058 | 32542635 ~ 32543676 (+) | True | G44702 |
AMCG00013472 | mRNA | upstream | 146054 | 31988690 ~ 31990176 (+) | True | AMCG00013472 |
AMCG00013469 | mRNA | upstream | 214855 | 31915101 ~ 31921375 (+) | True | AMCG00013469 |
AMCG00013468 | mRNA | upstream | 225059 | 31901530 ~ 31911171 (+) | False | AMCG00013468 |
AMCG00013465 | mRNA | upstream | 363037 | 31772421 ~ 31773193 (+) | True | AMCG00013465 |
AMCG00013462 | mRNA | upstream | 382822 | 31742807 ~ 31753408 (+) | True | AMCG00013462 |
AMCG00013474 | mRNA | downstream | 87594 | 32226171 ~ 32226557 (+) | True | AMCG00013474 |
AMCG00013473 | mRNA | downstream | 134852 | 32273429 ~ 32283927 (+) | True | AMCG00013473 |
AMCG00013479 | mRNA | downstream | 207561 | 32346138 ~ 32389962 (+) | True | AMCG00013479 |
AMCG00013477 | mRNA | downstream | 255241 | 32393818 ~ 32400452 (+) | True | AMCG00013477 |
AMCG00013478 | mRNA | downstream | 285185 | 32423762 ~ 32455686 (+) | False | AMCG00013478 |
TU55551 | other | upstream | 224429 | 31904968 ~ 31911801 (+) | True | AMCG00013468 |
TU55261 | other | upstream | 1359061 | 30776851 ~ 30777169 (+) | True | G44325 |
TU55111 | other | upstream | 1568011 | 30563368 ~ 30568219 (+) | True | AMCG00013417 |
TU55098 | other | upstream | 1640574 | 30490827 ~ 30495656 (+) | True | AMCG00013416 |
TU55045 | other | upstream | 1914021 | 30218910 ~ 30222209 (+) | False | AMCG00013396 |
TU55622 | other | downstream | 134691 | 32273268 ~ 32283499 (+) | False | AMCG00013473 |
TU55641 | other | downstream | 284699 | 32423276 ~ 32429887 (+) | False | AMCG00013478 |
TU55642 | other | downstream | 284699 | 32423276 ~ 32429887 (+) | True | AMCG00013478 |
TU55933 | other | downstream | 967715 | 33106292 ~ 33106595 (+) | True | G44870 |
TU55990 | other | downstream | 1237943 | 33376520 ~ 33394148 (+) | False | AMCG00013515 |