RNA id: TU55925


Basic Information

Item Value
RNA id TU55925
length 211
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G44862
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33056653 ~ 33056863 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TGATCGACTGTGGTTTGGCTTCCATGTCTCTCAGTGACGGCGACAGGCCATGCTTTGGAAAGTCCTGTTTTTTCGGTGGGGTCTGAAACAGCGTGCTGGGCATAAAGGATGAGAGGCGCTCGGATCGAGAATGTACAATAGAAAAAGGATAACAACACGTACAACTGATAACATCAATTGCAAAGATATCCCCGTTTGGCTTGTGTTTCGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU55904 lncRNA downstream 25398 33028267 ~ 33031255 (-) True G44848
TU55871 lncRNA downstream 118480 32934067 ~ 32938173 (-) True G44815
TU55856 lncRNA downstream 202888 32853256 ~ 32853765 (-) True G44803
TU55818 lncRNA downstream 298323 32756764 ~ 32758330 (-) True G44777
TU55786 lncRNA downstream 399421 32656705 ~ 32657232 (-) True G44749
TU55927 lncRNA upstream 32039 33088902 ~ 33090447 (-) True G44864
TU55935 lncRNA upstream 37534 33094397 ~ 33095418 (-) True G44872
TU56003 lncRNA upstream 286146 33343009 ~ 33348520 (-) True G44936
TU56007 lncRNA upstream 358670 33415533 ~ 33416219 (-) True G44940
TU56008 lncRNA upstream 359433 33416296 ~ 33422111 (-) True G44941
AMCG00013496 mRNA downstream 220055 32833847 ~ 32836598 (-) True AMCG00013496
AMCG00013488 mRNA downstream 428749 32622153 ~ 32627904 (-) True AMCG00013488
AMCG00013489 mRNA downstream 435715 32609881 ~ 32620938 (-) True AMCG00013489
AMCG00013483 mRNA downstream 475350 32572426 ~ 32581303 (-) True AMCG00013483
AMCG00013484 mRNA downstream 491299 32545177 ~ 32565354 (-) True AMCG00013484
AMCG00013507 mRNA upstream 39776 33096639 ~ 33108496 (-) True AMCG00013507
AMCG00013508 mRNA upstream 65109 33121972 ~ 33122871 (-) True AMCG00013508
AMCG00013506 mRNA upstream 73191 33130054 ~ 33143388 (-) True AMCG00013506
AMCG00013511 mRNA upstream 189301 33246164 ~ 33263876 (-) True AMCG00013511
AMCG00013513 mRNA upstream 297718 33354581 ~ 33366875 (-) True AMCG00013513
TU55769 other downstream 432735 32622181 ~ 32623918 (-) False AMCG00013488
TU55745 other downstream 488701 32565760 ~ 32567952 (-) True G44719
TU55173 other downstream 2570322 30483519 ~ 30486331 (-) True AMCG00013411
TU56122 other upstream 621361 33678224 ~ 33678907 (-) True G45037
TU56130 other upstream 635981 33692844 ~ 33699528 (-) True AMCG00013531
TU56648 other upstream 3902314 36959177 ~ 36959914 (-) True G45468
TU56784 other upstream 4073995 37130858 ~ 37133244 (-) True G45571
TU56785 other upstream 4073995 37130858 ~ 37223824 (-) False G45571

Expression Profile