RNA id: TU55931



Basic Information


Item Value
RNA id TU55931
length 235
lncRNA type inter_gene
GC content 0.65
exon number 1
gene id G44868
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33102639 ~ 33102873 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGGCTGATGCGGTTGCCGTCCTTGCCCAGCTTGAGGCGGCTCTTCTTGAAGTGGCCCTTGCGCTTCTTCACCCGGGGCTTCTCCTGGTACATCTGGTGGATGATGATGTTGAGCTCTCTCTCCACAATGTCGATCTCGCGCTCTGCCAGCTCCTGCTCCCGGCGCCGTAGGACCTCCTCCTGCTCCCGCTGCTCCTCTGCCGCCCGCGCCAGGGCCTCCTCCCACGAGCGCAGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU55930 lncRNA upstream 1952 33100474 ~ 33100687 (+) True G44867
TU55928 lncRNA upstream 7131 33094302 ~ 33095508 (+) True G44865
TU55924 lncRNA upstream 12212 33088816 ~ 33090427 (+) True G44861
TU55923 lncRNA upstream 13879 33083728 ~ 33088760 (+) True G44860
TU55832 lncRNA upstream 264796 32837315 ~ 32837843 (+) True G44790
TU55932 lncRNA downstream 294 33103167 ~ 33103392 (+) True G44869
TU55934 lncRNA downstream 19147 33122020 ~ 33125449 (+) True G44871
TU56025 lncRNA downstream 336962 33439835 ~ 33441164 (+) True G44954
TU56062 lncRNA downstream 429899 33532772 ~ 33533155 (+) True G44983
TU56191 lncRNA downstream 1830333 34933206 ~ 34933787 (+) True G45100
AMCG00013503 mRNA upstream 19228 33080737 ~ 33083411 (+) True AMCG00013503
AMCG00013505 mRNA upstream 41359 33056761 ~ 33061280 (+) True AMCG00013505
AMCG00013504 mRNA upstream 57285 33032612 ~ 33045354 (+) True AMCG00013504
AMCG00013501 mRNA upstream 80839 33015315 ~ 33021800 (+) True AMCG00013501
AMCG00013502 mRNA upstream 106555 32977931 ~ 32996084 (+) True AMCG00013502
AMCG00013509 mRNA downstream 89762 33192635 ~ 33239625 (+) True AMCG00013509
AMCG00013510 mRNA downstream 169853 33272726 ~ 33284978 (+) True AMCG00013510
AMCG00013512 mRNA downstream 226438 33329311 ~ 33347695 (+) True AMCG00013512
AMCG00013515 mRNA downstream 282244 33385117 ~ 33412841 (+) True AMCG00013515
AMCG00013516 mRNA downstream 339921 33442794 ~ 33449093 (+) True AMCG00013516
TU55641 other upstream 672752 32423276 ~ 32429887 (+) False AMCG00013478
TU55642 other upstream 672752 32423276 ~ 32429887 (+) True AMCG00013478
TU55622 other upstream 819140 32273268 ~ 32283499 (+) False AMCG00013473
TU55551 other upstream 1190838 31904968 ~ 31911801 (+) True AMCG00013468
TU55261 other upstream 2325470 30776851 ~ 30777169 (+) True G44325
TU55933 other downstream 3419 33106292 ~ 33106595 (+) True G44870
TU55990 other downstream 273647 33376520 ~ 33394148 (+) False AMCG00013515
TU56031 other downstream 339521 33442394 ~ 33446921 (+) False AMCG00013516
TU56113 other downstream 592719 33695592 ~ 33699545 (+) True G45029
TU56162 other downstream 1011800 34114673 ~ 34114939 (+) True G45072

Expression Profile