Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59833 |
| length | 900 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G47937 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 48059915 ~ 48060814 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030001 | metal ion transport | biological_process |
| GO:0006811 | ion transport | biological_process |
| GO:0006812 | cation transport | biological_process |
| GO:0006816 | calcium ion transport | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59832 | lncRNA | upstream | 323 | 48058733 ~ 48059592 (+) | True | G47936 |
| TU59724 | lncRNA | upstream | 240322 | 47752214 ~ 47819593 (+) | False | AMCG00013943 |
| TU59667 | lncRNA | upstream | 476013 | 47552159 ~ 47583902 (+) | True | G47810 |
| TU59659 | lncRNA | upstream | 514324 | 47545192 ~ 47545591 (+) | True | G47804 |
| TU59652 | lncRNA | upstream | 638686 | 47421016 ~ 47421229 (+) | True | G47797 |
| TU59854 | lncRNA | downstream | 101397 | 48162211 ~ 48162427 (+) | True | G47958 |
| TU59855 | lncRNA | downstream | 103057 | 48163871 ~ 48164673 (+) | True | G47959 |
| TU59856 | lncRNA | downstream | 103981 | 48164795 ~ 48165036 (+) | True | G47960 |
| TU59857 | lncRNA | downstream | 107825 | 48168639 ~ 48169640 (+) | True | G47961 |
| TU59870 | lncRNA | downstream | 118377 | 48179191 ~ 48179721 (+) | True | G47972 |
| AMCG00013943 | mRNA | upstream | 240192 | 47793939 ~ 47819723 (+) | True | AMCG00013943 |
| AMCG00013941 | mRNA | upstream | 329641 | 47724434 ~ 47730274 (+) | True | AMCG00013941 |
| AMCG00013939 | mRNA | upstream | 516481 | 47541233 ~ 47543434 (+) | True | AMCG00013939 |
| AMCG00013927 | mRNA | upstream | 831946 | 47222081 ~ 47227969 (+) | True | AMCG00013927 |
| AMCG00013924 | mRNA | upstream | 927739 | 47123708 ~ 47132176 (+) | True | AMCG00013924 |
| AMCG00013953 | mRNA | downstream | 25145 | 48085959 ~ 48097083 (+) | True | AMCG00013953 |
| AMCG00013952 | mRNA | downstream | 38862 | 48099676 ~ 48143917 (+) | True | AMCG00013952 |
| AMCG00013951 | mRNA | downstream | 84584 | 48145398 ~ 48158245 (+) | True | AMCG00013951 |
| AMCG00013960 | mRNA | downstream | 166601 | 48227415 ~ 48234227 (+) | True | AMCG00013960 |
| AMCG00013962 | mRNA | downstream | 175949 | 48236763 ~ 48239245 (+) | True | AMCG00013962 |
| TU59522 | other | upstream | 986207 | 47069701 ~ 47073708 (+) | False | AMCG00013919 |
| TU59106 | other | upstream | 2118009 | 45934659 ~ 45941906 (+) | True | G47398 |
| TU59011 | other | upstream | 2241960 | 45816372 ~ 45817955 (+) | False | AMCG00013872 |
| TU58857 | other | upstream | 2699033 | 45326658 ~ 45360882 (+) | True | G47206 |
| TU58815 | other | upstream | 2964246 | 45034772 ~ 45095669 (+) | True | AMCG00013838 |
| TU59915 | other | downstream | 187253 | 48248067 ~ 48249713 (+) | False | AMCG00013961 |
| TU59923 | other | downstream | 193480 | 48254294 ~ 48255821 (+) | False | AMCG00013961 |
| TU59933 | other | downstream | 207940 | 48268754 ~ 48269272 (+) | True | G48018 |
| TU59942 | other | downstream | 220249 | 48281063 ~ 48351285 (+) | True | G48026 |
| TU60059 | other | downstream | 481128 | 48541942 ~ 48545128 (+) | False | AMCG00013971 |
