Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU59854 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.68 |
| exon number | 1 |
| gene id | G47958 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 48162211 ~ 48162427 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04064 | NF-kappa B signaling pathway |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU59833 | lncRNA | upstream | 101397 | 48059915 ~ 48060814 (+) | True | G47937 |
| TU59832 | lncRNA | upstream | 102619 | 48058733 ~ 48059592 (+) | True | G47936 |
| TU59724 | lncRNA | upstream | 342618 | 47752214 ~ 47819593 (+) | False | AMCG00013943 |
| TU59667 | lncRNA | upstream | 578309 | 47552159 ~ 47583902 (+) | True | G47810 |
| TU59659 | lncRNA | upstream | 616620 | 47545192 ~ 47545591 (+) | True | G47804 |
| TU59855 | lncRNA | downstream | 1444 | 48163871 ~ 48164673 (+) | True | G47959 |
| TU59856 | lncRNA | downstream | 2368 | 48164795 ~ 48165036 (+) | True | G47960 |
| TU59857 | lncRNA | downstream | 6212 | 48168639 ~ 48169640 (+) | True | G47961 |
| TU59870 | lncRNA | downstream | 16764 | 48179191 ~ 48179721 (+) | True | G47972 |
| TU59880 | lncRNA | downstream | 38199 | 48200626 ~ 48201255 (+) | False | G47980 |
| AMCG00013951 | mRNA | upstream | 3966 | 48145398 ~ 48158245 (+) | True | AMCG00013951 |
| AMCG00013952 | mRNA | upstream | 18294 | 48099676 ~ 48143917 (+) | True | AMCG00013952 |
| AMCG00013953 | mRNA | upstream | 65128 | 48085959 ~ 48097083 (+) | True | AMCG00013953 |
| AMCG00013943 | mRNA | upstream | 342488 | 47793939 ~ 47819723 (+) | True | AMCG00013943 |
| AMCG00013941 | mRNA | upstream | 431937 | 47724434 ~ 47730274 (+) | True | AMCG00013941 |
| AMCG00013960 | mRNA | downstream | 64988 | 48227415 ~ 48234227 (+) | True | AMCG00013960 |
| AMCG00013962 | mRNA | downstream | 74336 | 48236763 ~ 48239245 (+) | True | AMCG00013962 |
| AMCG00013961 | mRNA | downstream | 77273 | 48239700 ~ 48258433 (+) | True | AMCG00013961 |
| AMCG00013963 | mRNA | downstream | 255830 | 48418257 ~ 48422793 (+) | True | AMCG00013963 |
| AMCG00013969 | mRNA | downstream | 328117 | 48490544 ~ 48494312 (+) | True | AMCG00013969 |
| TU59522 | other | upstream | 1088503 | 47069701 ~ 47073708 (+) | False | AMCG00013919 |
| TU59106 | other | upstream | 2220305 | 45934659 ~ 45941906 (+) | True | G47398 |
| TU59011 | other | upstream | 2344256 | 45816372 ~ 45817955 (+) | False | AMCG00013872 |
| TU58857 | other | upstream | 2801329 | 45326658 ~ 45360882 (+) | True | G47206 |
| TU58815 | other | upstream | 3066542 | 45034772 ~ 45095669 (+) | True | AMCG00013838 |
| TU59915 | other | downstream | 85640 | 48248067 ~ 48249713 (+) | False | AMCG00013961 |
| TU59923 | other | downstream | 91867 | 48254294 ~ 48255821 (+) | False | AMCG00013961 |
| TU59933 | other | downstream | 106327 | 48268754 ~ 48269272 (+) | True | G48018 |
| TU59942 | other | downstream | 118636 | 48281063 ~ 48351285 (+) | True | G48026 |
| TU60059 | other | downstream | 379515 | 48541942 ~ 48545128 (+) | False | AMCG00013971 |
