RNA id: TU60712



Basic Information


Item Value
RNA id TU60712
length 538
RNA type TUCP
GC content 0.51
exon number 1
gene id G48583
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49956192 ~ 49956729 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATTAACATTTAGCCAATGAATGTTCAGACTTTCCGCAGATCGTGTGCAGAGTGACTAAAGTCTGCTTGTTGCTCCCACGTAAACACACACTTCCCATCATAGCAATAGGAGATACTgaaccaaaacaagaaaaaatatataaactacaataatacaaaataagaagaCTATTGCTGTTAATACAGCTGTGGGGAGGAACAGCAGAGTGTGCAGCACAGCGCAGTCTGGAGAGGAGGGTCGCGCTGCGGCGGAATGATGGAAGACCACAGACGTGTAAGTGCATTGTTGTGTGTAACAGGATCTGAAGCATACGGACTGCTTCAACATGTACTTGTACCCGACAAAACGCCCAACTCGAACGAGCTGAAGTGCTGCAGCGGCATTTCATACCCAGTCCCCAGTGCCGGACGGGCTCGGTCCACAGCGGTCAGAACGAGGCTGCGCGGAGCTGGGCATGCGTGTGAGACGCGGACGGGTCAGTCTGTGGGCTGCCGTACAGAGGAGCTCGCTGTGGCCAAACACTGAACCTTGGTCTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU60672 lncRNA upstream 82815 49871106 ~ 49873377 (+) True G48560
TU60664 lncRNA upstream 98505 49857480 ~ 49857687 (+) True G48552
TU60552 lncRNA upstream 145226 49808148 ~ 49810966 (+) False AMCG00014038
TU60571 lncRNA upstream 162542 49793206 ~ 49793650 (+) True G48479
TU60553 lncRNA upstream 202165 49753584 ~ 49754027 (+) True G48467
AMCG00014049 mRNA upstream 27172 49927226 ~ 49929020 (+) True AMCG00014049
AMCG00014039 mRNA upstream 30489 49918627 ~ 49925703 (+) True AMCG00014039
AMCG00014050 mRNA upstream 39950 49910558 ~ 49916242 (+) True AMCG00014050
AMCG00014040 mRNA upstream 113877 49837425 ~ 49842315 (+) True AMCG00014040
AMCG00014038 mRNA upstream 142207 49808571 ~ 49813985 (+) True AMCG00014038
TU60704 other upstream 8110 49936815 ~ 49948082 (+) True G48578
TU60679 other upstream 41650 49913929 ~ 49914542 (+) True G48566
TU60549 other upstream 213678 49741852 ~ 49742514 (+) True G48464
TU60541 other upstream 232316 49723026 ~ 49723876 (+) True G48457
TU60542 other upstream 238764 49706843 ~ 49717428 (+) True AMCG00014032

Expression Profile