RNA id: AMCG00014062



Basic Information


Item Value
RNA id AMCG00014062
length 417
RNA type mRNA
GC content 0.52
exon number 4
gene id AMCG00014062
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 124143 ~ 136221 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ACATCGCTGTCAGAGACCTCCCACATGCTGCACCAGAATCTGAACTGCACAGTTAACTCCCTGTGTAACCGTAATGGACAGACCAACACAGCGCAGTGGATCTGTCCCGAGGAGCACAAACATGTGTCTCAGCAAACACCCCATCGCCACACTGGCGCTGACTGGGCAGATAAACAGAATCAGGGAACAGGCATGATGAATTATGCTGCCTTGAGCTTCACTGACAGCAGGACGAAGcctgagaggaagaggagggagatgGACAGACAGGCTGTGTATTCACAGAATCAGGGAACAGGCATGATGAATTACGCAGCCTTGAGCTTCATTGACAGCAGGACGAAGCccgagaggaagaggagggagattAACAGACAGGCTGTGTATTCACAGGTCCAGTACCACCAGACATACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84399 lncRNA downstream 10967 147188 ~ 247002 (+) False AMCG00014061
TU84405 lncRNA downstream 33683 169904 ~ 320321 (+) True G67587
TU84528 lncRNA downstream 665043 801264 ~ 801464 (+) True G67684
TU84529 lncRNA downstream 668316 804537 ~ 804746 (+) True G67685
TU84535 lncRNA downstream 845618 981839 ~ 1022813 (+) True G67690
AMCG00014065 mRNA upstream 22211 97427 ~ 101932 (+) True AMCG00014065
AMCG00014061 mRNA downstream 643 136864 ~ 162410 (+) True AMCG00014061
AMCG00014066 mRNA downstream 94357 230578 ~ 241128 (+) True AMCG00014066
AMCG00014068 mRNA downstream 116054 252275 ~ 257660 (+) True AMCG00014068
AMCG00014069 mRNA downstream 142909 279130 ~ 349175 (+) True AMCG00014069
AMCG00014071 mRNA downstream 242989 379210 ~ 386103 (+) True AMCG00014071
TU84388 other upstream 17021 58449 ~ 107122 (+) True G67577
TU84560 other downstream 1347564 1483785 ~ 1484093 (+) False AMCG00014099
TU84663 other downstream 1699211 1835432 ~ 1838125 (+) True AMCG00014104
TU84672 other downstream 1742870 1879091 ~ 1881041 (+) True G67801
TU84682 other downstream 1763999 1900220 ~ 1902615 (+) True AMCG00014111
TU84815 other downstream 1990651 2126872 ~ 2130145 (+) True G67896

Expression Profile