RNA id: AMCG00014066


Basic Information

Item Value
RNA id AMCG00014066
length 735
RNA type mRNA
GC content 0.52
exon number 4
gene id AMCG00014066
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 230578 ~ 241128 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AGTCGGGACACAGACATGTTGAATTATGCTGCCTTGAGCTTCACTGGCAGCAGGACGAAGCccgagaggaagaggagggagatgAACAGACAGGTTGTGTATGCTGATCTCTCACCAGTCACAAGACCAGCTGCCACCAGAGGTGGACAGCGGAGCCGCAGAGATGATCAGACTCTGTGTGACGCTCCTGCTTTTCTGCAAAATGTGAATGAGGGCACCGTCAGGTCCACTGTGCTCAGGACAGCCCAGCTGGGAGACTCGGTGACTCTGCTGTGTGACTTACAGGGGTCTTACTTGATCTGGTTCAAGCAGACCACTGCTCAGACACCCCGGAGCATAGCAACATCATACAACTACTTACCAGAGATCACATTGTTTAACGAGTTCAAGACTGACGCCCGCTTCACTGTGAAGAGGGACGAAGAAGGTTTTAACCTCACTATCGCCAGAACAGAGCCATCGGATGAAGCAACGTACTTCTGTGGAATATTGAGAACTAACCATGTGCATTTCGGCAACGGAACCTATTTAACGCTAAAGGGCTCCAAGTCCGTCAGCAGGAGAGTGGAGCAGCAGCCGGCGTCTGTCCCTGTCCAGTCAGGAGACAGTGTGACTCTGCAGTGTACAATATACACTGAGCCATGTGCAGGAGAGCACAGTGTTCATTGGTTCAGGCATGGCTCAGGAGAAGCCCTTCCAGGACTCATTTACACCCATGGGAACAGGAGTGATCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84528 lncRNA downstream 560136 801264 ~ 801464 (+) True G67684
TU84529 lncRNA downstream 563409 804537 ~ 804746 (+) True G67685
TU84535 lncRNA downstream 740711 981839 ~ 1022813 (+) True G67690
TU84543 lncRNA downstream 1008971 1250099 ~ 1250314 (+) True G67698
TU84544 lncRNA downstream 1034863 1275991 ~ 1276216 (+) True G67699
AMCG00014061 mRNA upstream 68168 136864 ~ 162410 (+) True AMCG00014061
AMCG00014062 mRNA upstream 94357 124143 ~ 136221 (+) True AMCG00014062
AMCG00014065 mRNA upstream 128646 97427 ~ 101932 (+) True AMCG00014065
AMCG00014068 mRNA downstream 11147 252275 ~ 257660 (+) True AMCG00014068
AMCG00014069 mRNA downstream 38002 279130 ~ 349175 (+) True AMCG00014069
AMCG00014071 mRNA downstream 138082 379210 ~ 386103 (+) True AMCG00014071
AMCG00014077 mRNA downstream 946431 1187559 ~ 1188536 (+) True AMCG00014077
AMCG00014083 mRNA downstream 993564 1234692 ~ 1244467 (+) True AMCG00014083
TU84388 other upstream 123456 58449 ~ 107122 (+) True G67577
TU84560 other downstream 1242657 1483785 ~ 1484093 (+) False AMCG00014099
TU84663 other downstream 1594304 1835432 ~ 1838125 (+) True AMCG00014104
TU84672 other downstream 1637963 1879091 ~ 1881041 (+) True G67801
TU84682 other downstream 1659092 1900220 ~ 1902615 (+) True AMCG00014111
TU84815 other downstream 1885744 2126872 ~ 2130145 (+) True G67896

Expression Profile