RNA id: AMCG00014086


Basic Information

Item Value
RNA id AMCG00014086
length 981
RNA type mRNA
GC content 0.53
exon number 1
gene id AMCG00014086
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1339056 ~ 1340036 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGTGAACCCAACACCTCCCTGCCCTCAGCCTCCTATTTTATCATCGTGGGGGTGCCAGGCCTGCAGGAACACTACACCACACTCTTCCCCATCTTCCTCCTCCTATTCCTGGCCACCATGCTAGGGAACCTGTTGATCATGGTGATGGTGTCCCTGGACCCCCGGCTCCACACACCCATGTACTTCTTCCTGTGGAACCTGGCTCTCCTGGATGTGCTGCTGACCACTACCATCATACCTAAGCTGCTGGTGGTGCTGCTGGGTCACAGGAGGACCATCTCCTTCACTGGATGCTTCCTGCAGATGTACTTTTTAGTTTCTTTCGGCACCACTGAAATTTTCCTCGTGGCGGCCATGGCTTATGACCGTTACGTGGCTGTGGTGAAGCCGCTGCATTACAACACCATGATCAGCACCAGGGTGTGCCTCACAATGATGGCCACAGTCTGGGGTCTGGGCTTCCTCGTCCCCCTGGTGTCTGTTGCCCTGGCCAGTTCAGTGCCATTCTGTACCTCCAATTATGTTCTACATGTTGTCTGTGACTACCCAACTATAATGTCTCTAGCCTGCACTGATGTGACGGCCCAGGTGACTTTTGCCCTGTCGCTCGCAATGGTGGTTGACTGGGGGGCCTTTGTGTTCGTACTGTGGTCTTACTGCAGGATCATAATGTCGGTagggaaaatgaaaactgtggaGAGCCGGAAGAAGGCCTTCTTCATGTGCTCCTCCCACatagtggtggtggtgctgtACTATGTCTCCTGCATTGTGGAGTTTATAGGGCTGAGGGTGGACAGCATTTCCCCCGATGGGCGTGTTTTCATCGGTGGGCTGAACTGCTTCCTCACCCCCCTGGTCAACCCCATCATCTACAGCTTAAGGAATGAGAAGATCAAGGCAGCAGCTCAGAGATACTTTGGACTCAAGTCTGCTATTCCACACACTGCCAAGAACACTGTCAGGGctgccaaataa

Function

GO: NA

KEGG:

id description
K04257 OLFR; olfactory receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84544 lncRNA upstream 62840 1275991 ~ 1276216 (+) True G67699
TU84543 lncRNA upstream 88742 1250099 ~ 1250314 (+) True G67698
TU84535 lncRNA upstream 316243 981839 ~ 1022813 (+) True G67690
TU84529 lncRNA upstream 534310 804537 ~ 804746 (+) True G67685
TU84528 lncRNA upstream 537592 801264 ~ 801464 (+) True G67684
TU84655 lncRNA downstream 480537 1820573 ~ 1821758 (+) True G67792
TU84650 lncRNA downstream 500129 1840165 ~ 1842445 (+) True G67789
TU84797 lncRNA downstream 737267 2077303 ~ 2077602 (+) True G67882
TU84819 lncRNA downstream 808413 2148449 ~ 2148654 (+) True G67899
TU84829 lncRNA downstream 993455 2333491 ~ 2333944 (+) True G67907
AMCG00014087 mRNA upstream 5338 1317879 ~ 1333718 (+) True AMCG00014087
AMCG00014084 mRNA upstream 21597 1316473 ~ 1317459 (+) True AMCG00014084
AMCG00014085 mRNA upstream 32528 1305044 ~ 1306528 (+) True AMCG00014085
AMCG00014078 mRNA upstream 53149 1284930 ~ 1285907 (+) True AMCG00014078
AMCG00014079 mRNA upstream 93608 1244471 ~ 1245448 (+) True AMCG00014079
AMCG00014088 mRNA downstream 13554 1353590 ~ 1354567 (+) True AMCG00014088
AMCG00014092 mRNA downstream 31156 1371192 ~ 1381490 (+) True AMCG00014092
AMCG00014093 mRNA downstream 41464 1381500 ~ 1382480 (+) True AMCG00014093
AMCG00014094 mRNA downstream 50925 1390961 ~ 1391938 (+) True AMCG00014094
AMCG00014089 mRNA downstream 72314 1412350 ~ 1433608 (+) True AMCG00014089
TU84388 other upstream 1231934 58449 ~ 107122 (+) True G67577
TU84560 other downstream 143749 1483785 ~ 1484093 (+) False AMCG00014099
TU84663 other downstream 495396 1835432 ~ 1838125 (+) True AMCG00014104
TU84672 other downstream 539055 1879091 ~ 1881041 (+) True G67801
TU84682 other downstream 560184 1900220 ~ 1902615 (+) True AMCG00014111
TU84815 other downstream 786836 2126872 ~ 2130145 (+) True G67896