RNA id: AMCG00014122



Basic Information


Item Value
RNA id AMCG00014122
length 1037
RNA type mRNA
GC content 0.49
exon number 6
gene id AMCG00014122
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2179646 ~ 2195573 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CACGATCCATGCCAATCCCAGTCTCAGATTTCTTGCAGGGCCATGGTGTAGCAGATGAAGTGATTACTCGGCTGGAGGAtgaaaagAAGACACCAAAATATCTTGCCATCTTCCATCCACTCTGTTACTCCACTATGATGACCAATGGTCTTGTCATGAGGCACGTTCTGTGGTGTTGGGCTGGAGGGTTTTTATCAATGCTTGCACCTCTGATTCTTGTTGTGCGCTTGCCGTTCTGTGGACCTGATAAAGTCCTCCACTACTTCTGTGATCACTCTTCAGTGCTCAGGCTGGCCTGTGCAATCATCGTCATCAATAGCATTCTGGGCTTAACCTTCGCTCTTGCTCCTCATTCCTCTCACCCTCATCTTGCTTCCAATGTGAAAATTGTGAGGTTAGTGCTGCAGATCTCAGGTACAGAGGGCAGAGCCAAGGCCTTCTCCACCTGCGGCTCACACCTACTGGTTATCTCTGTGTTCTTCCTCACGGCCATAGGAGTCTACATCTCCTACAGGGTCCCTGGGACCTCAGCTGTTCTGCGTGTCATGGCAGCTGTGTTTCAGAACGTCTTCCCTCCCCTTGTGAATCTGATTATCTTCTGCCTGAGGACTAAAGAGATCAGGGACAGCTTGGTGAAAACACTGAAGAAGAGCAGAGTCTTTCCAAAGTACATTCTACCTCCTCATTTTAAAGGGGAATTTTCTCCTTATTTGCATACTGGCAGCAGACACAAGCTTGCACACCCCCATATCCTTCTGTCAGTATTGAGTATCTCCAGCTCAGCAGGAAGAGCCAAGGCCGTGTCCACCTGCAGCTCACACCTGCTGGTCATCTCTGTGTTCTATCTCACGACTGCAGGGGTCTTCATCTCCTACAGGATTCCTGGGACCTCAGTGGACATGCGTGTTATGGGGTCTGTGATTCATAATGTCTTCCCTGCCCTCATGAATCCGATCATCTACTGCCTGAGGACTAAAGAGATCAGGGGCAGCTTGGTGAAAAGCTTGAACAAGAACAGTATCTTCCCAGGTAGCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84819 lncRNA upstream 30992 2148449 ~ 2148654 (+) True G67899
TU84797 lncRNA upstream 102044 2077303 ~ 2077602 (+) True G67882
TU84650 lncRNA upstream 337201 1840165 ~ 1842445 (+) True G67789
TU84655 lncRNA upstream 357888 1820573 ~ 1821758 (+) True G67792
TU84544 lncRNA upstream 903430 1275991 ~ 1276216 (+) True G67699
TU84829 lncRNA downstream 137918 2333491 ~ 2333944 (+) True G67907
TU84830 lncRNA downstream 154556 2350129 ~ 2373305 (+) True G67908
TU84919 lncRNA downstream 550671 2746244 ~ 2755484 (+) True G67983
TU84927 lncRNA downstream 571929 2767502 ~ 2768837 (+) True G67988
TU84933 lncRNA downstream 586766 2782339 ~ 2802044 (+) True G67994
AMCG00014124 mRNA upstream 7106 2161757 ~ 2172540 (+) True AMCG00014124
AMCG00014120 mRNA upstream 66280 2083426 ~ 2113366 (+) True AMCG00014120
AMCG00014113 mRNA upstream 151135 2024598 ~ 2028511 (+) True AMCG00014113
AMCG00014112 mRNA upstream 157380 2008602 ~ 2022266 (+) True AMCG00014112
AMCG00014106 mRNA upstream 254584 1921339 ~ 1925062 (+) True AMCG00014106
AMCG00014123 mRNA downstream 26042 2221615 ~ 2222904 (+) True AMCG00014123
AMCG00014121 mRNA downstream 44065 2239638 ~ 2253288 (+) True AMCG00014121
AMCG00014125 mRNA downstream 81136 2276709 ~ 2325390 (+) True AMCG00014125
AMCG00014139 mRNA downstream 182661 2378234 ~ 2389212 (+) True AMCG00014139
AMCG00014129 mRNA downstream 204845 2400418 ~ 2401353 (+) True AMCG00014129
TU84815 other upstream 49501 2126872 ~ 2130145 (+) True G67896
TU84682 other upstream 277031 1900220 ~ 1902615 (+) True AMCG00014111
TU84672 other upstream 298605 1879091 ~ 1881041 (+) True G67801
TU84663 other upstream 341521 1835432 ~ 1838125 (+) True AMCG00014104
TU84560 other upstream 695553 1483785 ~ 1484093 (+) False AMCG00014099
TU84895 other downstream 511267 2706840 ~ 2710329 (+) False AMCG00014146
TU84896 other downstream 511267 2706840 ~ 2710329 (+) False AMCG00014146
TU84897 other downstream 511267 2706840 ~ 2710329 (+) False AMCG00014146
TU84898 other downstream 513451 2709024 ~ 2710329 (+) True AMCG00014146
TU85565 other downstream 2453627 4649200 ~ 4651964 (+) True G68475

Expression Profile