RNA id: AMCG00014123


Basic Information

Item Value
RNA id AMCG00014123
length 372
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00014123
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2221615 ~ 2222904 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atgattaaaaaacacaatgttccATCTCTGCTGGCTTTTCACAGAACAGCCATGGCTGATGCAAACTACACAGGATCAATGATCCTTCTGTCAGTATTGCGTATCTCCAGCTCAGGGGGAAGAGCCAAGGCCGTGTCCACCTGCAGCTCACACCTGCTGGTCCTCTCTGTGTTCTTCCTCACGACAGCAGGGGTCTTCATCTCCTACAGGATTCCTGGGACCTCCGTGGACATGCGTATCATGGGGTCTGTGATTCATAATGTCTTCCCTGCCCTCATGAATCCGATTATCTACTGCCTGAGGACTAAAGAGATCAGGGACAGCTTGGTGAACACCCTGAAAAAGAGCAAAATTTTTCCAGGTCGCAAGTGA

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process
GO:0016020 membrane cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84819 lncRNA upstream 72961 2148449 ~ 2148654 (+) True G67899
TU84797 lncRNA upstream 144013 2077303 ~ 2077602 (+) True G67882
TU84650 lncRNA upstream 379170 1840165 ~ 1842445 (+) True G67789
TU84655 lncRNA upstream 399857 1820573 ~ 1821758 (+) True G67792
TU84544 lncRNA upstream 945399 1275991 ~ 1276216 (+) True G67699
TU84829 lncRNA downstream 110587 2333491 ~ 2333944 (+) True G67907
TU84830 lncRNA downstream 127225 2350129 ~ 2373305 (+) True G67908
TU84919 lncRNA downstream 523340 2746244 ~ 2755484 (+) True G67983
TU84927 lncRNA downstream 544598 2767502 ~ 2768837 (+) True G67988
TU84933 lncRNA downstream 559435 2782339 ~ 2802044 (+) True G67994
AMCG00014122 mRNA upstream 26042 2179646 ~ 2195573 (+) True AMCG00014122
AMCG00014124 mRNA upstream 49075 2161757 ~ 2172540 (+) True AMCG00014124
AMCG00014120 mRNA upstream 108249 2083426 ~ 2113366 (+) True AMCG00014120
AMCG00014113 mRNA upstream 193104 2024598 ~ 2028511 (+) True AMCG00014113
AMCG00014112 mRNA upstream 199349 2008602 ~ 2022266 (+) True AMCG00014112
AMCG00014121 mRNA downstream 16734 2239638 ~ 2253288 (+) True AMCG00014121
AMCG00014125 mRNA downstream 53805 2276709 ~ 2325390 (+) True AMCG00014125
AMCG00014139 mRNA downstream 155330 2378234 ~ 2389212 (+) True AMCG00014139
AMCG00014129 mRNA downstream 177514 2400418 ~ 2401353 (+) True AMCG00014129
AMCG00014127 mRNA downstream 191658 2414562 ~ 2422277 (+) True AMCG00014127
TU84815 other upstream 91470 2126872 ~ 2130145 (+) True G67896
TU84682 other upstream 319000 1900220 ~ 1902615 (+) True AMCG00014111
TU84672 other upstream 340574 1879091 ~ 1881041 (+) True G67801
TU84663 other upstream 383490 1835432 ~ 1838125 (+) True AMCG00014104
TU84560 other upstream 737522 1483785 ~ 1484093 (+) False AMCG00014099
TU84895 other downstream 483936 2706840 ~ 2710329 (+) False AMCG00014146
TU84896 other downstream 483936 2706840 ~ 2710329 (+) False AMCG00014146
TU84897 other downstream 483936 2706840 ~ 2710329 (+) False AMCG00014146
TU84898 other downstream 486120 2709024 ~ 2710329 (+) True AMCG00014146
TU85565 other downstream 2426296 4649200 ~ 4651964 (+) True G68475

Expression Profile