RNA id: AMCG00014125


Basic Information

Item Value
RNA id AMCG00014125
length 513
RNA type mRNA
GC content 0.50
exon number 4
gene id AMCG00014125
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2276709 ~ 2325390 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGGAGGACATTGTGATGCCAAACATGGAGGATAATGAGGACAAGGAGGACgatgaagaagaggaagagggggtAACATTAGTGGCAGCGATTCCTGGGACTTCTGTGGACATGCGTGTCATGGAGTCTGTGATTCAGCATGTCTTCCCTGCCCTCATGAATCCGACTATCTACTGCCTCAGAACTAAAGAGATCAGGGACAGCTTGGTGAAAACCCTGAAAAAGGGCAAACTCTTCCCAGGAGTCTATATCTCCTACAGGATTCCTGGGACCTCAGTGGACATACGTGGTATGGGGTCTGTGATTATGATTGTCTTCCCTGCCCTCATGAATCCGATCATCTACTGCTTGAGGACTAAAGAGATCAGGGACAGCTTGGAGATGAAGACCCCTGCTGTCGTGAGGAAGAACACAGAGATGACCAGCAGGTGTGAGCTGCAGGTGGACACGGCCTTGGCTCTTCCCACTGAGCTGGAGATACGCAATACTGAGATAAGGATCTTCACATAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84819 lncRNA upstream 128055 2148449 ~ 2148654 (+) True G67899
TU84797 lncRNA upstream 199107 2077303 ~ 2077602 (+) True G67882
TU84650 lncRNA upstream 434264 1840165 ~ 1842445 (+) True G67789
TU84655 lncRNA upstream 454951 1820573 ~ 1821758 (+) True G67792
TU84544 lncRNA upstream 1000493 1275991 ~ 1276216 (+) True G67699
TU84829 lncRNA downstream 8101 2333491 ~ 2333944 (+) True G67907
TU84830 lncRNA downstream 24739 2350129 ~ 2373305 (+) True G67908
TU84919 lncRNA downstream 420854 2746244 ~ 2755484 (+) True G67983
TU84927 lncRNA downstream 442112 2767502 ~ 2768837 (+) True G67988
TU84933 lncRNA downstream 456949 2782339 ~ 2802044 (+) True G67994
AMCG00014121 mRNA upstream 23421 2239638 ~ 2253288 (+) True AMCG00014121
AMCG00014123 mRNA upstream 53805 2221615 ~ 2222904 (+) True AMCG00014123
AMCG00014122 mRNA upstream 81136 2179646 ~ 2195573 (+) True AMCG00014122
AMCG00014124 mRNA upstream 104169 2161757 ~ 2172540 (+) True AMCG00014124
AMCG00014120 mRNA upstream 163343 2083426 ~ 2113366 (+) True AMCG00014120
AMCG00014139 mRNA downstream 52844 2378234 ~ 2389212 (+) True AMCG00014139
AMCG00014129 mRNA downstream 75028 2400418 ~ 2401353 (+) True AMCG00014129
AMCG00014127 mRNA downstream 89172 2414562 ~ 2422277 (+) True AMCG00014127
AMCG00014140 mRNA downstream 109427 2434817 ~ 2438719 (+) True AMCG00014140
AMCG00014135 mRNA downstream 125659 2451049 ~ 2454556 (+) True AMCG00014135
TU84815 other upstream 146564 2126872 ~ 2130145 (+) True G67896
TU84682 other upstream 374094 1900220 ~ 1902615 (+) True AMCG00014111
TU84672 other upstream 395668 1879091 ~ 1881041 (+) True G67801
TU84663 other upstream 438584 1835432 ~ 1838125 (+) True AMCG00014104
TU84560 other upstream 792616 1483785 ~ 1484093 (+) False AMCG00014099
TU84895 other downstream 381450 2706840 ~ 2710329 (+) False AMCG00014146
TU84896 other downstream 381450 2706840 ~ 2710329 (+) False AMCG00014146
TU84897 other downstream 381450 2706840 ~ 2710329 (+) False AMCG00014146
TU84898 other downstream 383634 2709024 ~ 2710329 (+) True AMCG00014146
TU85565 other downstream 2323810 4649200 ~ 4651964 (+) True G68475