RNA id: AMCG00014128



Basic Information


Item Value
RNA id AMCG00014128
length 765
RNA type mRNA
GC content 0.59
exon number 8
gene id AMCG00014128
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2539703 ~ 2542398 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACCTTGACTCCCATGCCTGCCCTGGGGCGGGGTCTAGGGCCCGGCCTGTATAAGAGGTGGAAGATGAAGATCCTTTTATTGCTGATGGTGGCAGTGGCAGTGGCTCAATCCAGCCCAGTCGCCGAGTCCGAGCCAGTGCTGCCCATACTGAGAGAAGAAGCCAGCAACAGCCTGCTGGAAGCAGAGGAGCAGGTCTCCAACATCGCTGTGGTGGCTGAGTCCGGCCCAGTCCCCGAATCTGAGCCAGTGCTGCCCATACTGGGAGAGGAAGCCATCGACAGCctgctggaggaagaggaggaggtcTCCGACGCTGCCTTGAGTGAGGAGATGGCAGGGAATGGgctgggtgGCACGCGCTCTTGCATGACTGGTGCATTTCAGGGACACTGCTACCTGTTCTTCTCCAGCCGCAAGACTGCCCCCGAAGCTGAGTTCTTCTGCCGTGACAATTTCCCAGGGGGACACCTGGCCTCGGTGACCAACCGTGACCTGCATGGAAAGTTGATGAACCTGGTCATTGCGTCCAGCGGGGACCGAGTCCCTACCTGGATCGGCGCGTATAACTTTAAAAAGACGGGTCGCTTCTTGTGGCTGGATGGGTCCTTTTGGAGCTACTCTGACTGGATGTCTGGCGAGCCCAACAACCTGAACAACAGACAGTTCTGCGTGGAGATGGGAGCACTGGGGAACAGCTGGTGGAGAGACACAGAGTGCACCCAGAGGCAGGCGTTCATCTGCTCCTACCCTTACAGCGGCTGA

Function


GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84830 lncRNA upstream 166398 2350129 ~ 2373305 (+) True G67908
TU84829 lncRNA upstream 205759 2333491 ~ 2333944 (+) True G67907
TU84819 lncRNA upstream 391049 2148449 ~ 2148654 (+) True G67899
TU84797 lncRNA upstream 462101 2077303 ~ 2077602 (+) True G67882
TU84650 lncRNA upstream 697258 1840165 ~ 1842445 (+) True G67789
TU84919 lncRNA downstream 203846 2746244 ~ 2755484 (+) True G67983
TU84927 lncRNA downstream 225104 2767502 ~ 2768837 (+) True G67988
TU84933 lncRNA downstream 239941 2782339 ~ 2802044 (+) True G67994
TU84941 lncRNA downstream 250344 2792742 ~ 2797809 (+) True G67997
TU84995 lncRNA downstream 433816 2976214 ~ 2976510 (+) True G68046
AMCG00014137 mRNA upstream 42556 2486625 ~ 2497147 (+) True AMCG00014137
AMCG00014135 mRNA upstream 85147 2451049 ~ 2454556 (+) True AMCG00014135
AMCG00014140 mRNA upstream 100984 2434817 ~ 2438719 (+) True AMCG00014140
AMCG00014127 mRNA upstream 117426 2414562 ~ 2422277 (+) True AMCG00014127
AMCG00014129 mRNA upstream 138350 2400418 ~ 2401353 (+) True AMCG00014129
AMCG00014130 mRNA downstream 6956 2549354 ~ 2556568 (+) True AMCG00014130
AMCG00014126 mRNA downstream 16201 2558599 ~ 2561177 (+) True AMCG00014126
AMCG00014146 mRNA downstream 165417 2707815 ~ 2710329 (+) False AMCG00014146
AMCG00014147 mRNA downstream 232980 2775378 ~ 2778596 (+) True AMCG00014147
AMCG00014148 mRNA downstream 246197 2788595 ~ 2790836 (+) True AMCG00014148
TU84815 other upstream 409558 2126872 ~ 2130145 (+) True G67896
TU84682 other upstream 637088 1900220 ~ 1902615 (+) True AMCG00014111
TU84672 other upstream 658662 1879091 ~ 1881041 (+) True G67801
TU84663 other upstream 701578 1835432 ~ 1838125 (+) True AMCG00014104
TU84560 other upstream 1055610 1483785 ~ 1484093 (+) False AMCG00014099
TU84895 other downstream 164442 2706840 ~ 2710329 (+) False AMCG00014146
TU84896 other downstream 164442 2706840 ~ 2710329 (+) False AMCG00014146
TU84897 other downstream 164442 2706840 ~ 2710329 (+) False AMCG00014146
TU84898 other downstream 166626 2709024 ~ 2710329 (+) True AMCG00014146
TU85565 other downstream 2106802 4649200 ~ 4651964 (+) True G68475

Expression Profile