RNA id: AMCG00014147



Basic Information


Item Value
RNA id AMCG00014147
length 459
RNA type mRNA
GC content 0.53
exon number 3
gene id AMCG00014147
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2775378 ~ 2778596 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTGACTTTGTTGTGTGGCTCTGCAGGTCCAGGTGTGCTGGTCAGTGTGGGGCTCAGTGAGACGGTGCCGTGTGATCTGTCTGCCTCTGAGGTGACCTGGTACCGACACAAGCCTGGCCAGTCTCCACGGGCCATCCTGCAGTATTCACGCAGCTCTGCTCTGCCTCCCACTTACTACACTGGGTTTAGGAGAACAAAGTTTACTATTTCTAAAGATAATGGGACTTCAGTTTTAATCATTGTCAATGCCACTGAGGAAGATTCAGCTACTTACTACTGCAGCCAGCAGAGACACGCTGTGTTTGGCAACGGGACACAGCTTCACTTCAAAGGAGAGGATGGAGTCCAGTACGCCGCCCTGGATCTGTCTGCTCGAACTCGAAGGAACCGACAGAAACACAGCAGGGTGGACGACATGGCGGTCATTTACTCTGATGTCAGCCACGGCCAGCCTTAa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84927 lncRNA upstream 6541 2767502 ~ 2768837 (+) True G67988
TU84919 lncRNA upstream 19894 2746244 ~ 2755484 (+) True G67983
TU84830 lncRNA upstream 402073 2350129 ~ 2373305 (+) True G67908
TU84829 lncRNA upstream 441434 2333491 ~ 2333944 (+) True G67907
TU84819 lncRNA upstream 626724 2148449 ~ 2148654 (+) True G67899
TU84933 lncRNA downstream 3743 2782339 ~ 2802044 (+) True G67994
TU84941 lncRNA downstream 14146 2792742 ~ 2797809 (+) True G67997
TU84995 lncRNA downstream 197618 2976214 ~ 2976510 (+) True G68046
TU85148 lncRNA downstream 445978 3224574 ~ 3226499 (+) True G68151
TU85150 lncRNA downstream 448263 3226859 ~ 3228126 (+) True G68153
AMCG00014146 mRNA upstream 65049 2707815 ~ 2710329 (+) False AMCG00014146
AMCG00014126 mRNA upstream 214201 2558599 ~ 2561177 (+) True AMCG00014126
AMCG00014130 mRNA upstream 218810 2549354 ~ 2556568 (+) True AMCG00014130
AMCG00014128 mRNA upstream 232980 2539703 ~ 2542398 (+) True AMCG00014128
AMCG00014137 mRNA upstream 278231 2486625 ~ 2497147 (+) True AMCG00014137
AMCG00014148 mRNA downstream 9999 2788595 ~ 2790836 (+) True AMCG00014148
AMCG00014149 mRNA downstream 40946 2819542 ~ 2821456 (+) True AMCG00014149
AMCG00014161 mRNA downstream 130833 2909429 ~ 2915164 (+) True AMCG00014161
AMCG00014152 mRNA downstream 144804 2923400 ~ 2928310 (+) True AMCG00014152
AMCG00014163 mRNA downstream 217849 2996445 ~ 3030703 (+) True AMCG00014163
TU84895 other upstream 65049 2706840 ~ 2710329 (+) False AMCG00014146
TU84896 other upstream 65049 2706840 ~ 2710329 (+) False AMCG00014146
TU84897 other upstream 65049 2706840 ~ 2710329 (+) False AMCG00014146
TU84898 other upstream 65049 2709024 ~ 2710329 (+) True AMCG00014146
TU84815 other upstream 645233 2126872 ~ 2130145 (+) True G67896
TU85565 other downstream 1870604 4649200 ~ 4651964 (+) True G68475
TU85567 other downstream 1870604 4649200 ~ 4651964 (+) False G68475
TU86015 other downstream 4567599 7346195 ~ 7349467 (+) True G68830
TU86046 other downstream 4635044 7413640 ~ 7416594 (+) True G68848
TU86705 other downstream 7224462 10003058 ~ 10008648 (+) True G69406

Expression Profile