RNA id: AMCG00014148



Basic Information


Item Value
RNA id AMCG00014148
length 732
RNA type mRNA
GC content 0.53
exon number 4
gene id AMCG00014148
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2788595 ~ 2790836 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTGCTGCTGTGCGCCGCGGTTTGTGCGCTTCTCACTGCCGGCGGGGCTGCAGGAGGAGCCAGAGATGAGGCTGTTCCTGTGACTGGGCCAGTCAATGACCAGGGGCAGGACTGTGTTATTGGAGTCATTGGAAACTCCACTGTGCTTCCCTGTGTTTATAAAGGTGATGAAACACTGGAGCCACAAACTGTTTCTGTTGAATGGAGATCAGATGATGGCCTGGTGGTCCATGCCTTTGTCCAGGGGAGGGATGCTCTAGAAAATCAAGACCCCTCATACAGGGGGAGAACAGAGCTGTTCACAGCAAGACTGCCTGAAGGGAACTTCTCCCTGAGACTCTCTGATGTTATTGAGAAGGACCCGGGGAAatatgtgtgttattttcataaAGAGGACATGGAATCCACCAAACAATTGGACCAGGTTTGTCTGGCAGCTGCAGCCCGTTACTCAGAGACAGAGCTGCAGGGAGTCAGAGACCCAGATGGAGATTACGCAGATTTCAGCTGCTCCTCCTCGGGGGGCTTTCCTGAGCCCAGGGTCCACTGGCTCATTAACTTACAGCCCCCCCCTGTGGACACAGTGATGACACTGGTGTCTCAGGACCCTATCACTGGGCTGTACACTGTCTTCAGCCTCCTCACTGTCCACTCCACACAGGACATCGCTGTGAGCTGCACCATTGAAAACCTCCAGCTTAACGAGAGCAAGACGTCAACGCTCATTAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84927 lncRNA upstream 19758 2767502 ~ 2768837 (+) True G67988
TU84919 lncRNA upstream 33111 2746244 ~ 2755484 (+) True G67983
TU84830 lncRNA upstream 415290 2350129 ~ 2373305 (+) True G67908
TU84829 lncRNA upstream 454651 2333491 ~ 2333944 (+) True G67907
TU84819 lncRNA upstream 639941 2148449 ~ 2148654 (+) True G67899
TU84941 lncRNA downstream 1906 2792742 ~ 2797809 (+) True G67997
TU84995 lncRNA downstream 185378 2976214 ~ 2976510 (+) True G68046
TU85148 lncRNA downstream 433738 3224574 ~ 3226499 (+) True G68151
TU85150 lncRNA downstream 436023 3226859 ~ 3228126 (+) True G68153
TU85167 lncRNA downstream 584001 3374837 ~ 3375148 (+) True G68166
AMCG00014147 mRNA upstream 9999 2775378 ~ 2778596 (+) True AMCG00014147
AMCG00014146 mRNA upstream 78266 2707815 ~ 2710329 (+) False AMCG00014146
AMCG00014126 mRNA upstream 227418 2558599 ~ 2561177 (+) True AMCG00014126
AMCG00014130 mRNA upstream 232027 2549354 ~ 2556568 (+) True AMCG00014130
AMCG00014128 mRNA upstream 246197 2539703 ~ 2542398 (+) True AMCG00014128
AMCG00014149 mRNA downstream 28706 2819542 ~ 2821456 (+) True AMCG00014149
AMCG00014161 mRNA downstream 118593 2909429 ~ 2915164 (+) True AMCG00014161
AMCG00014152 mRNA downstream 132564 2923400 ~ 2928310 (+) True AMCG00014152
AMCG00014163 mRNA downstream 205609 2996445 ~ 3030703 (+) True AMCG00014163
AMCG00014162 mRNA downstream 253502 3044338 ~ 3044745 (+) True AMCG00014162
TU84895 other upstream 78266 2706840 ~ 2710329 (+) False AMCG00014146
TU84896 other upstream 78266 2706840 ~ 2710329 (+) False AMCG00014146
TU84897 other upstream 78266 2706840 ~ 2710329 (+) False AMCG00014146
TU84898 other upstream 78266 2709024 ~ 2710329 (+) True AMCG00014146
TU84815 other upstream 658450 2126872 ~ 2130145 (+) True G67896
TU85565 other downstream 1858364 4649200 ~ 4651964 (+) True G68475
TU85567 other downstream 1858364 4649200 ~ 4651964 (+) False G68475
TU86015 other downstream 4555359 7346195 ~ 7349467 (+) True G68830
TU86046 other downstream 4622804 7413640 ~ 7416594 (+) True G68848
TU86705 other downstream 7212222 10003058 ~ 10008648 (+) True G69406

Expression Profile