RNA id: AMCG00014205


Basic Information

Item Value
RNA id AMCG00014205
length 808
RNA type mRNA
GC content 0.55
exon number 6
gene id AMCG00014205
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4320194 ~ 4325828 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AACAGGTTGTTTTGAGTGTTGCATTAAGTGCCTGGGAGGAGTTCCTTATGCCTCGCTGGTCGCCACCATCCTCTGCTTCTCCGGCGTCGCGCTGTTCTGCGGTTGCGGTCACGTGGCGCTGACGGGGACGGTCACCATCTTGGAAAACCACTTCTCAAAGGTCACCAGCGACCACGCTTTGTTAACTGATGTAGTCCAGCTCATGCAGTACGTCATTTATGGCATCGCCTCGTTCTTCTTCCTGTATGGCATCATCCTTCTGGCGGAGGGTTTCTACACCACCAGCGCGGTGAAGGAGCTGCACAGCGAGTTCAAAACCACCGCCTGCGGCCGATGCATCAGTGGGATGTTTGTGTTCCTGACCTACGTCCTCGGAGTGGCCTGGCTGGGAGTGTTCGGCTTCTCGGCCGTGCCCGTCTTCTTGTTCTACAACATGTGGACAACCTGCGAAGCCATGAGATCTCCGGTGTCAAACTTGACGTCTGTGGACTCGATCTGTGTGGACGTCCGGCAGTACGGTATCATCCCCTGGAACGCCACTCCCGGCAAAGCTTGCGGCTCCACACTCGGTGACATCTGCAACACGAGCGAGTTCTATCTCTCCTACCACCTCTACATCGTGGCCTGCGCGGGGGCGGGAGCCACCGTCATTGCACTGATCCACTTCCTCATGATTCTGTCAGCAAATTGGGCCTACTTAAAGGACGCAAGTCACATGCATGCGTACCAAGACATCAAAATGAAGGAAGAGCAAGAACTGCAAGACATCCAGTCCCGCTCAAAGGAACGCCTCAATTCTTACACATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU85456 lncRNA downstream 20510 4298305 ~ 4299684 (-) True G68386
TU85381 lncRNA downstream 190453 4105518 ~ 4129741 (-) False G68336
TU85386 lncRNA downstream 190453 4105518 ~ 4129741 (-) False G68336
TU85378 lncRNA downstream 190453 4127222 ~ 4129741 (-) False G68336
TU85379 lncRNA downstream 190453 4127222 ~ 4129741 (-) True G68336
TU85481 lncRNA upstream 90828 4416656 ~ 4416934 (-) True G68406
TU85564 lncRNA upstream 321874 4647702 ~ 4648211 (-) True G68474
TU85610 lncRNA upstream 560097 4885925 ~ 4886283 (-) True G68514
TU85633 lncRNA upstream 1008264 5334092 ~ 5334383 (-) True G68535
TU85635 lncRNA upstream 1072000 5397828 ~ 5398235 (-) True G68537
AMCG00014203 mRNA downstream 22732 4293901 ~ 4297462 (-) True AMCG00014203
AMCG00014193 mRNA downstream 398879 3914862 ~ 3921315 (-) True AMCG00014193
AMCG00014191 mRNA downstream 488911 3807265 ~ 3831283 (-) True AMCG00014191
AMCG00014189 mRNA downstream 619433 3700069 ~ 3700761 (-) True AMCG00014189
AMCG00014190 mRNA downstream 641938 3657077 ~ 3678256 (-) True AMCG00014190
AMCG00014206 mRNA upstream 56775 4382603 ~ 4382845 (-) True AMCG00014206
AMCG00014204 mRNA upstream 58317 4384145 ~ 4389193 (-) True AMCG00014204
AMCG00014210 mRNA upstream 185993 4511821 ~ 4520399 (-) True AMCG00014210
AMCG00014211 mRNA upstream 234335 4560163 ~ 4565944 (-) True AMCG00014211
AMCG00014212 mRNA upstream 262569 4588397 ~ 4605961 (-) True AMCG00014212
TU85055 other downstream 1491050 2825562 ~ 2829144 (-) True G68088
TU84998 other downstream 1676287 2641059 ~ 2643907 (-) False AMCG00014144
TU84851 other downstream 1777497 2540317 ~ 2542697 (-) False AMCG00014134
TU84738 other downstream 2402012 1916727 ~ 1918182 (-) True G67843
TU84714 other downstream 2417579 1900640 ~ 1902615 (-) True G67832
TU86038 other upstream 3052260 7378088 ~ 7380780 (-) True AMCG00014271
TU86071 other upstream 3091770 7417598 ~ 7423291 (-) False AMCG00014278
TU86293 other upstream 3811503 8137331 ~ 8139126 (-) False AMCG00014297
TU86302 other upstream 3830401 8156229 ~ 8158590 (-) True AMCG00014298
TU86412 other upstream 4057457 8383285 ~ 8384224 (-) True G69156

Expression Profile