Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014216 |
| length | 507 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 3 |
| gene id | AMCG00014216 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 4951330 ~ 4958249 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016787 | hydrolase activity | molecular_function |
| id | description |
|---|---|
| K17623 | PUDP, HDHD1; pseudouridine 5'-phosphatase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU85603 | lncRNA | upstream | 94100 | 4857029 ~ 4857230 (+) | True | G68509 |
| TU85589 | lncRNA | upstream | 165729 | 4785326 ~ 4785601 (+) | True | G68497 |
| TU85563 | lncRNA | upstream | 303117 | 4647710 ~ 4648213 (+) | True | G68473 |
| TU85517 | lncRNA | upstream | 362902 | 4584474 ~ 4588428 (+) | False | G68434 |
| TU85518 | lncRNA | upstream | 362902 | 4584474 ~ 4588428 (+) | True | G68434 |
| TU85636 | lncRNA | downstream | 493039 | 5451288 ~ 5451521 (+) | True | G68538 |
| TU85659 | lncRNA | downstream | 699001 | 5657250 ~ 5704009 (+) | True | G68559 |
| TU85700 | lncRNA | downstream | 821129 | 5779378 ~ 5782386 (+) | True | G68589 |
| TU85751 | lncRNA | downstream | 938821 | 5897070 ~ 5956185 (+) | True | G68623 |
| TU85765 | lncRNA | downstream | 1054433 | 6012682 ~ 6013059 (+) | True | G68635 |
| AMCG00014214 | mRNA | upstream | 99897 | 4837723 ~ 4851433 (+) | True | AMCG00014214 |
| AMCG00014213 | mRNA | upstream | 205328 | 4723654 ~ 4746002 (+) | True | AMCG00014213 |
| AMCG00014208 | mRNA | upstream | 368121 | 4568669 ~ 4583209 (+) | True | AMCG00014208 |
| AMCG00014209 | mRNA | upstream | 402923 | 4520802 ~ 4548407 (+) | True | AMCG00014209 |
| AMCG00014207 | mRNA | upstream | 452374 | 4460775 ~ 4498956 (+) | True | AMCG00014207 |
| AMCG00014217 | mRNA | downstream | 103583 | 5061832 ~ 5062272 (+) | True | AMCG00014217 |
| AMCG00014218 | mRNA | downstream | 121260 | 5079509 ~ 5079783 (+) | True | AMCG00014218 |
| AMCG00014220 | mRNA | downstream | 156401 | 5114650 ~ 5118152 (+) | True | AMCG00014220 |
| AMCG00014219 | mRNA | downstream | 170922 | 5129171 ~ 5130645 (+) | True | AMCG00014219 |
| AMCG00014221 | mRNA | downstream | 549775 | 5508024 ~ 5550098 (+) | True | AMCG00014221 |
| TU85565 | other | upstream | 299366 | 4649200 ~ 4651964 (+) | True | G68475 |
| TU85567 | other | upstream | 299366 | 4649200 ~ 4651964 (+) | False | G68475 |
| TU84896 | other | upstream | 2241001 | 2706840 ~ 2710329 (+) | False | AMCG00014146 |
| TU86015 | other | downstream | 2387946 | 7346195 ~ 7349467 (+) | True | G68830 |
| TU86046 | other | downstream | 2455391 | 7413640 ~ 7416594 (+) | True | G68848 |
| TU86705 | other | downstream | 5044809 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU87778 | other | downstream | 9378609 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU88057 | other | downstream | 10717382 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
